Vibrio sp. dhg: DBX26_21550
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Entry
DBX26_21550 CDS
T11094
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vid Vibrio sp. dhg
Pathway
vid00330
Arginine and proline metabolism
vid00480
Glutathione metabolism
vid01100
Metabolic pathways
vid01110
Biosynthesis of secondary metabolites
vid04148
Efferocytosis
Module
vid_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DBX26_21550
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DBX26_21550
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DBX26_21550
Enzymes [BR:
vid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DBX26_21550
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXT73519
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Position
2:complement(1310250..1311449)
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AA seq
399 aa
AA seq
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MAHSASVLGFQSFSSPALPAETVDLIQTSVEQFGAPLLMLDCDMIRKNYRALSQALPNVT
LHFALKPLPHPTVVKTLLEEGASFDLATSGEVDLVKQQGVPADRTIHTHPIKRDRDIRDA
LAYGCNVFVVDNLNELEKFKAYSHKVELLVRLSFRNSDVFADLSKKFGCTPEQALNIIET
AKEWNIRIKGLSFHVGSQTMNPQKYVDAIRTCKQVMDEVVARGLPALSTLDIGGGFPVSY
SEKVMPIDEFCVPINEALNELPETVQVIAEPGRFIVAESVTSVASVMGQAERDGQMWYYL
DDGIYGSFSGLMFDDAQYPLVTLKHEGEYLPSVLSGPTCDSIDVIAENVMLPKLENGDLI
IGRMMGAYTSATATDFNFFKRAQTIVINERDERSERLFG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctcattctgcgtctgtactaggttttcaatctttttcttctccggctttaccagcg
gagacagtcgatcttattcaaacatctgttgaacaatttggcgcgccattgttaatgctc
gactgcgatatgattcgtaaaaattacagagcactaagccaagcattaccgaatgtcact
ctgcactttgcattgaagccattgcctcatccaacggtggttaaaaccctattggaagaa
ggcgcaagtttcgatttggcaacatcaggtgaagttgacctggtaaaacagcaaggtgtg
cctgcagatcgtacgattcacactcaccctattaaacgtgaccgtgatattcgtgatgcg
ttagcgtatggctgcaatgtgtttgttgttgataacctgaacgagctagaaaagttcaaa
gcgtacagccacaaagtagagctacttgtgcgtttgagcttccgtaactcagacgtgttt
gccgacttatcgaaaaaattcggttgtacgccagaacaggcactcaacatcatcgaaacg
gcgaaagagtggaatattcgtattaagggactgtcgttccatgttggttcacaaacgatg
aacccacagaaatacgttgatgcaatccgtacttgtaagcaagtgatggacgaagttgtg
gctcgcggtttacctgcattgagcacactggatattggtggtggcttcccggtttcttac
tcagaaaaagtgatgccaattgatgaattctgcgtaccgattaacgaagcgttaaacgag
ttgccagaaacagtacaggttattgcagaaccaggtcgctttattgttgcagagtcagta
accagcgtggcatcagtaatgggtcaagcagagcgtgacggtcaaatgtggtactacctg
gatgatggtatctacggctcattcagcggtttgatgtttgatgacgcgcaatacccattg
gtaacgttgaagcacgaaggcgagtacttaccaagtgtgttgtctggcccaacttgcgac
agcattgatgtgatcgcagaaaacgtaatgctaccaaaactagaaaacggcgacttgatc
attggccgtatgatgggcgcttacaccagcgctacagcaacggattttaactttttcaaa
cgtgctcaaacgattgtgattaacgagcgtgatgagcgcagcgaacgtctgtttggttaa
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