KEGG   Vibrio sp. dhg: DBX26_23955
Entry
DBX26_23955       CDS       T11094                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vid  Vibrio sp. dhg
Pathway
vid00260  Glycine, serine and threonine metabolism
vid00460  Cyanoamino acid metabolism
vid00630  Glyoxylate and dicarboxylate metabolism
vid00670  One carbon pool by folate
vid00680  Methane metabolism
vid01100  Metabolic pathways
vid01110  Biosynthesis of secondary metabolites
vid01120  Microbial metabolism in diverse environments
vid01200  Carbon metabolism
vid01230  Biosynthesis of amino acids
vid01240  Biosynthesis of cofactors
vid04981  Folate transport and metabolism
Module
vid_M00140  C1-unit interconversion, prokaryotes
vid_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vid00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    DBX26_23955 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    DBX26_23955 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DBX26_23955 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    DBX26_23955 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    DBX26_23955 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    DBX26_23955 (glyA)
Enzymes [BR:vid01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     DBX26_23955 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2 DegT_DnrJ_EryC1 OKR_DC_1 Aminotran_5
Other DBs
NCBI-ProteinID: AXT73969
LinkDB
Position
2:1841886..1843148
AA seq 420 aa
MFNTTQNIEAYDSELWSAIVKEEQRQEDHIELIASENYTSPRVMQAQGSKLTNKYAEGYP
AKRYYGGCKFVDEVEVLAIERAKQLFGAEYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGSHVNFSGKIYNAVQYGLNAETGEIDYEQVEQLALEHKPKMIVAGFSAYSR
VVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPTPVPFADVVATTTHKTLRGPRGGLI
VSRDAELEKKINSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFAEYQKQVVANAQVMAKV
FIERGFDVVSGGTDNHLFLLSLIRQKLTGKAADAALGMAGITVNKNAVPDDPQSPFVTSG
LRIGTPVITTRGFGEAECEMLAGWISDILDVLDDPQALASTIEVVGSKVQSLCRDFPAYQ
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtttaacactactcaaaacatcgaagcgtacgacagtgaactatggtcggcgattgta
aaagaagaacagagacaagaagaccacattgagctgattgcttctgaaaactacaccagc
ccacgagtgatgcaagctcaaggtagtaaactaaccaataaatacgctgagggttacccg
gcaaaaagatactacggtggctgtaaattcgttgatgaagtagaagtattggcgattgaa
cgtgcaaaacaactgttcggtgcggaatacgcgaacgtacaaccacactcagggtcacaa
gcaaacgctgccgtgtacatggctctttgtgaaccaggtgacacagtactaggcatgagc
cttgctcacggtggtcacttgactcacggttcgcacgttaacttttcaggcaaaatttac
aacgctgttcaatacggtctaaacgctgaaacgggtgaaatcgactacgaacaagttgaa
caactagctcttgagcacaagcctaaaatgatcgttgctggtttctcagcatactcacgt
gtcgttgactggcaacgcttccgcgatatcgcggacaaagttggcgcttacctattcgtt
gatatggcgcacgtagcgggattagttgcagctggtgtttatccaaccccagtacctttc
gcggatgttgtagcaaccacaacacacaaaacgctacgcggtccacgcggtggtttgatt
gtttctcgcgacgctgaactagagaaaaagatcaactctgctgttttccctggtggtcag
ggtggccctctaatgcacgtgattgcggcaaaagcagtagcgtttaaagaggcgttagag
ccagaattcgctgaataccagaaacaagttgtggctaatgctcaggtaatggcgaaagta
tttatcgagcgtggtttcgacgttgtatcgggtggtacagacaatcacttattcctgttg
agcctaatccgtcagaaattgacaggtaaagcggcagacgcagcacttggcatggcgggt
atcaccgtaaacaaaaatgctgtaccggacgacccacaatctccattcgttacttcaggc
ctgcgcattggtacgccagtgattacaacgcgtggtttcggtgaagcggaatgtgaaatg
ctagcaggttggatctcagacattcttgatgtccttgatgacccgcaagcgctggcaagc
acgattgaagtcgtaggaagcaaagtgcagtcactatgccgtgatttccctgcataccaa
tag

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