Vagococcus intermedius: OL234_04940
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Entry
OL234_04940 CDS
T09229
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vie
Vagococcus intermedius
Brite
KEGG Orthology (KO) [BR:
vie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vie03400
]
OL234_04940
DNA repair and recombination proteins [BR:
vie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OL234_04940
Archaeal homologous recombinant proteins
OL234_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WEG74246
UniProt:
A0AAF0CWM4
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All DBs
Position
1069824..1070996
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AA seq
390 aa
AA seq
DB search
MKFLHTADWHIGKKLNGFDLLEEQEYAFKQILTLAKEEDVDGVIIAGDLYDRAIPPIEAI
KAFDGMLERLNIIEKLPIYAISGNHDGANRLNFANQWMAENHLFLHTKLEEAFQPIEIEG
IQLFLLPFFDPIDARIYYGVEDVEEMKTINHAMARVVKDLEKKFDPNKKQVLVTHFNVTG
KKNPDYKLTSETTSTVGGLNSVSAEHFNKFHYVALGHLHLWQASPDEHIRYSGSPVKFNT
KEAKNEKGVYIVELSEEGTIYLKFHKIKPNKDLIVLKGSFEELISEAFYTQQPTKGSAFF
SIKLTSRSCDSHIRQKLSDIYGDIVELTYHLPSIELTEMDKKFKVRTSRSIEEVVENFYA
DVTCGDSLTKSQKKIVEDIVLTLNKKENNQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttacatacggctgattggcatatcggcaaaaagcttaatggatttgacttg
ttagaagaacaagaatatgcttttaaacaaattctaacacttgctaaagaagaagatgtg
gatggtgttattattgcaggtgatttatacgacagggctattcctcctatagaggcaatt
aaagcctttgatggcatgttagaacgattaaatataattgagaaacttccaatttatgct
attagtggtaaccacgatggggcaaatcgattaaactttgctaaccagtggatggcagaa
aaccatttatttctacacacaaaattagaagaagcctttcagccaattgagatagagggt
attcagttatttttgttaccattttttgatccaatcgatgcacgtatctattatggcgtc
gaagatgttgaagagatgaaaacaattaaccacgctatggcacgagttgtgaaggattta
gaaaaaaagtttgacccgaataaaaaacaagtattagtaacacactttaacgtaacgggt
aaaaaaaatcctgattacaaactaaccagtgagacaacttcaacagtaggtggattaaat
agtgtatcagctgaacattttaataaattccattatgtcgctttaggacacctgcacctt
tggcaagctagcccggatgagcatattaggtatagtggttcacctgttaaatttaatacc
aaagaggccaaaaatgagaagggtgtttatattgttgaactaagtgaagagggtacaatc
tatttgaaattccataaaataaaaccgaataaagatttaattgtcctgaaaggaagtttt
gaagaacttatttctgaagcattttatacgcaacagccaacaaaaggaagtgcttttttt
agtattaaattaaccagtcggtcatgtgactcacatatacggcaaaagttaagcgatatt
tatggagatatcgttgaactgacctaccaccttccttcgattgaattaactgaaatggat
aaaaaatttaaagtaagaacgagtcggagcatagaagaagttgtcgaaaatttttatgct
gatgtgacatgtggcgattcgctgactaaaagtcagaagaaaatagttgaagacattgta
ctaacattgaataaaaaggagaataatcaatga
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