Vagococcus intermedius: OL234_05045
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Entry
OL234_05045 CDS
T09229
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vie
Vagococcus intermedius
Brite
KEGG Orthology (KO) [BR:
vie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vie03032
]
OL234_05045
03036 Chromosome and associated proteins [BR:
vie03036
]
OL234_05045
03400 DNA repair and recombination proteins [BR:
vie03400
]
OL234_05045
DNA replication proteins [BR:
vie03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OL234_05045
Chromosome and associated proteins [BR:
vie03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OL234_05045
DNA repair and recombination proteins [BR:
vie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OL234_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Glycos_trans_3N
HU-DNA_bdg
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
WEG74267
UniProt:
A0AAF0IA94
LinkDB
All DBs
Position
1095417..1095692
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELIEKVAEKADLTKKDATTAVDAVFSTIQELLADGEKVQLIGFGNFEVRDRAARK
GRNPQTGKEIDIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattgattgaaaaagttgcagaaaaagctgacttaactaaaaaa
gacgctacaactgcagttgatgcagtattctctacaatccaagaattacttgctgacgga
gaaaaagttcaattaatcggttttggtaacttcgaagtgcgcgatcgtgcagcacgtaaa
ggacgtaacccacaaactggtaaagaaattgatatccctgcaagcaaagtacctgcattc
aaaccaggtaaagcattgaaagatgcagttaaatag
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