Vagococcus intermedius: OL234_09340
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Entry
OL234_09340 CDS
T09229
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vie
Vagococcus intermedius
Brite
KEGG Orthology (KO) [BR:
vie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OL234_09340 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vie03019
]
OL234_09340 (rnc)
03009 Ribosome biogenesis [BR:
vie03009
]
OL234_09340 (rnc)
03036 Chromosome and associated proteins [BR:
vie03036
]
OL234_09340 (rnc)
Enzymes [BR:
vie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OL234_09340 (rnc)
Messenger RNA biogenesis [BR:
vie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OL234_09340 (rnc)
Ribosome biogenesis [BR:
vie03009
]
Eukaryotic type
90S particles
RNase
OL234_09340 (rnc)
Prokaryotic type
rRNA processing factors
OL234_09340 (rnc)
Chromosome and associated proteins [BR:
vie03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OL234_09340 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WEG73153
UniProt:
A0AAF0I5S8
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All DBs
Position
complement(2008120..2008815)
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AA seq
231 aa
AA seq
DB search
MNEQLLQLIKKRFQVEFKDTTLLEDAFTHSSYVNEHRYLELTDNERLEFLGDAVLELIIS
EYLYGKFTDLPEGKLTKMRAAIVCEDSLAKFAKACQFDHYIRLGKGEENSNGRQRPALLC
DLFESFLGALYLDQGLVAAEKFVAQVIFPKIESGAFSHEMDHKTALQEILQRNGDVAISY
QLVGEEGPAHNRQFAVEVSVEGHVIGRGQGKSKKMAEQSAAAAAISDLNNN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacaattattacagttgataaagaaaaggtttcaagttgaatttaaagatacc
acactattagaagacgcatttactcattcatcttatgtcaatgagcatcgatatttagaa
ctaactgacaatgagcgtttggaatttttaggagatgctgttttagagctaattatttca
gaatacttatatgggaaatttacagatttaccagaaggtaaattaactaaaatgcgagca
gcgattgtttgtgaagatagtttagctaaatttgctaaagcgtgtcagtttgaccactat
attcgtttaggtaaaggggaagagaattccaatggtcgtcaaagacctgccttattatgt
gacttattcgaatcatttttaggagctttatatttggatcaagggttggttgcagctgaa
aagtttgtagcacaagttatttttccgaaaatagaatctggtgctttttcacatgagatg
gatcataagactgcgcttcaagaaatattacaacgaaacggtgacgtggctatctcttat
caattggtcggagaagaaggacctgcccataatcgtcaattcgctgttgaagtcagtgtt
gaaggacatgttattggaagagggcaaggaaaatctaaaaaaatggcggagcagagcgca
gcagctgcagcaatatcagatttgaacaataattaa
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