Vagococcus intermedius: OL234_09565
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Entry
OL234_09565 CDS
T09229
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vie
Vagococcus intermedius
Brite
KEGG Orthology (KO) [BR:
vie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vie03400
]
OL234_09565 (radA)
DNA repair and recombination proteins [BR:
vie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OL234_09565 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_16
ABC_tran
AAA
AAA_22
DUF7129
nSTAND3
SLFN-g3_helicase
RecA
AAA_14
AAA_24
NTPase_1
Rad51
AAA_30
Elong_Iki1
KdpD
NPHP3_N
GvpD_P-loop
ATPase_2
KTI12
AAA_5
NACHT
Zeta_toxin
MCM
AAA_18
AAA_19
MeaB
RUBY_RBDX
HypA
CbiA
SRP54
DAP3
APS_kinase
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WEG73197
UniProt:
A0AAF0CUN7
LinkDB
All DBs
Position
complement(2054363..2055751)
Genome browser
AA seq
462 aa
AA seq
DB search
MAKKAKTQFECQACGYISPKYLGRCPNCGQWNEMLEVKLQEEVSRNSRVSLAGKRTTATK
LGEVASKKEPRVKTKLGELNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSQQLHQSGGK
VLYVSGEESAEQIKMRAERLSIEGNDFFVYPETDMSNIRQTIEELAPDYVIIDSIQTMMQ
PEISSATGSVSQVRETTAELMQIAKTNGIAIFIVGHVTKEGSLAGPRMLEHMVDTVLYFE
GDRHHTFRILRAVKNRFGSTNEIGIFEMKEQGLVEVQNPSEAFLEERIDGATGSAIVVSM
EGTRPILVEVQSLVTPTMFGNAKRTATGLDYNRVSLIMAVLEKRAGLLLQNQDAYLKAAG
GVKLDEPAIDLAIAVALASSYKEKGTKPTECFVGEIGLTGEIRRVNRIEQRVVEAQKLGF
KKMYLPKNNLQGWEAPKGIEIVGVATLGEALHKIFEKSEAAF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagcaaaaacacagtttgaatgccaagcttgtgggtatatctctccgaaa
tatttgggacgttgtccaaattgtgggcaatggaatgaaatgttggaagtaaaactgcaa
gaggaagtatcacgtaatagtcgtgttagtttggcaggcaagcgaacaacagctactaaa
ttaggggaagttgcatctaagaaagaaccacgtgtgaaaacaaaattaggtgaactgaat
cgtgtgctaggtggcggtgtcgtaccaggttcactagttttaattggtggagatccgggg
attggaaagtcaactttattgttacaagtatcgcaacaattacatcaaagtggtgggaaa
gtactctatgtttcaggtgaagaaagtgctgaacagattaagatgcgagcggaacgttta
agcattgagggtaacgatttttttgtttaccctgaaaccgatatgtctaatatccgccaa
actattgaagagttggctcctgactacgttatcattgattcaattcaaacgatgatgcaa
ccagaaatttccagtgcaacgggcagtgttagtcaagtgcgtgaaacaacagctgaatta
atgcagattgcaaaaacaaatggtattgctatttttattgttggccatgttacaaaggaa
gggtcgttggcaggaccgagaatgttagaacacatggtagatactgtgttgtactttgaa
ggggatcgccatcacacatttaggatactaagagcggtcaaaaatcgttttggttcaacc
aatgagattggtatttttgaaatgaaagagcaaggattggtggaagttcaaaatccttcc
gaagcctttttagaagaacgaattgatggagcgacgggctcagcaatcgttgtgtcgatg
gaaggaacgagaccaatcttggttgaggttcagtctttggtaacacctaccatgtttgga
aatgcgaagagaacggcaactggactagattataatcgcgtatcattaattatggcagtt
cttgaaaaacgtgcaggtctattattacaaaaccaagatgcatacttaaaagcagcggga
ggggtcaaattggatgagccggcgattgatttggctatagcggttgcgttagcctcaagc
tacaaagaaaaaggaactaaaccaacagaatgtttcgtcggcgaaataggcttaaccggt
gaaattcgtcgtgtcaatcggattgagcaacgtgtcgttgaagctcaaaaattaggtttt
aaaaaaatgtaccttccaaaaaataatctgcaagggtgggaagctcctaaaggaattgag
attgtaggagttgccacattaggagaagcgttacataaaatttttgaaaaatcggaagcg
gcattttaa
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