Virgibacillus sp. 6R: BKP57_00430
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Entry
BKP57_00430 CDS
T04596
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig00300
Lysine biosynthesis
vig00470
D-Amino acid metabolism
vig01100
Metabolic pathways
vig01110
Biosynthesis of secondary metabolites
vig01120
Microbial metabolism in diverse environments
vig01230
Biosynthesis of amino acids
Module
vig_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
vig_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BKP57_00430
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKP57_00430
Enzymes [BR:
vig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BKP57_00430
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
API90454
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All DBs
Position
complement(86313..87620)
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AA seq
435 aa
AA seq
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MIIDNHPFTVNEQGHLEIGGLDSVTLAKKYGTPLYVYDVQMIRDNCRAFVNTFQNMGVTA
KVAYASKAFSSIAMVQVIKQEGMYLDVVSEGELYTALHAGYPTEKIHFHGNNKSIAELRM
AIEHNIGCIVVDNFQEIEHIRSLLKTYDKQMDVLMRVTPGIESKTHHYIMTGNEDSKFGF
NLQNGQAETAFLQMHNDPYIRFQGLHCHIGSQIFETDRFILATSVLFQELRTWKERHGYT
PNVLNLGGGYGIRYTKDDAPISYAPFVEELVNEVQKQVEALAIPMPEIWLEPGRAIAGNA
GITLYTVGAMKEIPGIRNYVAVDGGMTDNLRPALYQAKYEAVLANKAAAPTETNVSIAGK
CCESGDMLIWDLPLPHVSQNDILAVFSTGAYGYSMANHYNRFAKPAVVFVENGEDKLVVQ
RETYQDIIRHDLSYE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgataattgataaccatccatttactgtaaatgaacaaggtcatttagaaataggcggt
ttagacagtgttacgcttgcgaaaaaatatggtactcctttgtatgtttatgatgtccaa
atgattcgcgacaattgtcgggcgtttgtaaacacatttcaaaatatgggcgtaactgca
aaagttgcgtatgcaagtaaagctttttcatccatcgccatggttcaagttataaaacaa
gagggcatgtatttggatgttgtgtctgaaggagagttatatacagctttacatgctgga
tacccaactgaaaagatacattttcatgggaataataaaagcattgctgaactaaggatg
gcgatagaacataatattgggtgtattgtggtagataattttcaagaaattgaacatatt
cgcagcttattgaaaacgtatgataaacagatggatgttttaatgcgcgttacaccaggg
attgaatcaaaaacacaccactatattatgactgggaatgaagattccaagttcggattc
aacttacaaaacggacaagcagaaaccgcgtttttacaaatgcataatgatccatatatt
cgctttcagggccttcattgccatatcggctcgcaaatttttgaaacagatcgttttata
ctcgctacaagtgttttgtttcaggaattacgtacatggaaggagaggcatggttataca
ccgaatgtgttaaatttaggtggaggttatggaattcgctacacgaaagatgacgcgcct
atttcctatgccccatttgtagaagagttagttaacgaggtacaaaagcaagtagaagca
ttagctattccaatgccggaaatctggttagaaccaggaagagcaatcgctggtaatgct
ggaattactttgtatacagtaggtgcaatgaaagaaattccaggaatccgtaattatgta
gcggttgatggaggtatgacagataatttacgtccagcactgtatcaggcaaagtatgaa
gctgtgctcgctaataaggcagctgcaccaacagaaacaaacgtatcgattgccggtaaa
tgttgtgaatcaggcgacatgcttatttgggatcttccattaccacatgtttcgcagaat
gatattttagctgttttttcaacgggcgcgtatggatattcgatggcgaatcattacaat
cgttttgccaagccagcagttgtgtttgtagaaaatggcgaagataagcttgtcgtccag
cgagaaacctatcaagatatcatccgtcacgatttaagttatgaatag
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