Virgibacillus sp. 6R: BKP57_00540
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Entry
BKP57_00540 CDS
T04596
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vig03016
]
BKP57_00540
Enzymes [BR:
vig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BKP57_00540
Transfer RNA biogenesis [BR:
vig03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BKP57_00540
Prokaryotic type
BKP57_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Ribosomal_L32p
Motif
Other DBs
NCBI-ProteinID:
API90475
LinkDB
All DBs
Position
108062..108979
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AA seq
305 aa
AA seq
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MELIFLGTGAGVPSKERNVSAIALSLLQEQNSIWLFDCGEATQHQILHTSLKPRKINKIF
ITHMHGDHIYGLPGFLSSRSFQGGDTPLTIYGPKGLKQYVETSLALSETHLAYAISFVEV
TDQMVIEAGQFQVFVQLLEHGIPCFGYRVVEKDKPGELLVNKLKDRGIEPGPIYQEIKEN
DHVTIPHIGTIYRKDVLGEPNRGKIISLIGDTRFSKDHIRLAQNADILIHEATFGKDKQN
LAHRYFHSTTLEAAQLASESNCKHLILTHISSRYQQEANEQLLQEAREIFPNTELANDFS
RFTIT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatttttcttggtactggagctggagttccctccaaagaaagaaacgtttca
gctatagcgttatcgttattacaagaacagaatagtatttggttgtttgattgtggggaa
gcaacacagcatcaaattttgcatacaagcctgaagccacgtaagataaataaaatattt
attacacatatgcatggcgatcatatctatggcttacctggttttctaagtagtcgctct
tttcaaggaggagacacgccgttaaccatctatggtccaaagggattaaaacaatatgtc
gaaacgagcttggctttgagcgaaacacatttagcttatgccatatctttcgtggaagta
accgatcaaatggtcattgaggcagggcagtttcaagtttttgttcaattattagaacac
ggaattccgtgctttggctatcgcgtcgttgaaaaagataagccaggagaattactcgtt
aataaactaaaggatagaggaattgaaccaggccccatctatcaggaaattaaagaaaac
gaccatgtcaccatacctcacatagggactatctaccgaaaagatgtgttgggggagcca
aacagaggaaaaattatttctctgattggtgatactcgattttctaaagaccacatacgc
ttggctcaaaatgccgatatacttattcatgaagcgacctttggaaaagataaacaaaat
cttgcacaccgttacttccattctactacgttagaagcagcacaattagcgagtgaaagt
aattgtaaacatctcattttgacgcatatttcttcccgttaccagcaagaagcaaatgaa
cagctgttacaggaagcccgagaaatatttccgaatacagaattagccaacgatttttcc
agatttaccattacgtag
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