Virgibacillus sp. 6R: BKP57_02255
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Entry
BKP57_02255 CDS
T04596
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig00020
Citrate cycle (TCA cycle)
vig00190
Oxidative phosphorylation
vig00650
Butanoate metabolism
vig00720
Other carbon fixation pathways
vig01100
Metabolic pathways
vig01110
Biosynthesis of secondary metabolites
vig01120
Microbial metabolism in diverse environments
vig01200
Carbon metabolism
Module
vig_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vig_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vig_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKP57_02255
00650 Butanoate metabolism
BKP57_02255
09102 Energy metabolism
00190 Oxidative phosphorylation
BKP57_02255
00720 Other carbon fixation pathways
BKP57_02255
Enzymes [BR:
vig01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BKP57_02255
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
HI0933_like
FAD_oxidored
NAD_binding_8
PKMT_2nd
DAO
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
API90778
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Position
complement(464505..466268)
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AA seq
587 aa
AA seq
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MNKRKIAVVGGGLAGLMATIKAAEAGVSVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGD
SPWLHFDDTVYGGDFLANQPQVKAMCDAAPGIIHMFDRMGVMFNRTPEGLLDFRRFGGTQ
MHRTAYAGATTGQQLLYAVDEQVRRYEVEGLVTKYENWEFVRAVIDEEGVGRGIVAQNVK
THEIKAFPSDATIFATGGPGIIFGKSTNSMINTGSAASKLYQQGAKYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGEPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFVGEDPRKVPMKIFPAVHYSMGGLWV
DINQMTNIPGIFAAGECDYSQHGANRLGANSLLSAIYGGAVAGPKAMEYIEGLDKHVDDL
SANLFEENVKVEQDNFDKLMSMDGEENAYQLHKELGQWMTDNVTVVRENKKLLETDEKIQ
ELLQRFENININDTSRWSNQGVMFTRQLENMLHLARVITQGAYNRNESRGAHYKPEFPDR
NDEDWLKTTIAEFDMEEKAPKFSYEDVDISLIKPRKRDYTKKSEGSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgaaaaattgccgtagttggcggaggtttggctggcttaatggcaacaata
aaagcagcagaagcaggagtaagtgttgatttattttcaattgttcctgtaaagcgctct
cactctgtatgtgctcaaggtggaataaatggtgcagtcaatacgaaaggggaaggagac
tctccttggcttcactttgatgatacagtgtatggtggagatttcttggcaaatcagccg
caagtaaaagcgatgtgtgacgcagcacctggaattatacacatgtttgatcgtatgggt
gttatgtttaaccgtacaccggaaggattgctggactttcgccgatttggtggaacacaa
atgcacagaacagcatatgcaggggcaaccacagggcaacaattgctttatgcggtagat
gaacaagtacgtcgctatgaagtagagggccttgttacaaaatatgaaaactgggaattt
gttcgggcggtaattgatgaagaaggcgttggtagaggaatcgtagctcaaaatgtgaaa
acacacgagatcaaagcattcccgtctgacgcaactatttttgccactggtggacctgga
attatcttcggtaaatctaccaattcaatgattaatacaggatctgctgccagcaaattg
tatcagcaaggggcaaaatatgcgaatggcgaatttattcaaattcatccaactgccatc
ccaggtgatgataaattacgattaatgagtgaatctgctcgtggtgaaggtggcagaatt
tggacatataaagatggagagccatggtatttcttagaagagaaatatccagcttatgga
aaccttgtaccaagagatatcgcaacacgtgaaatatttgatgtatgtgttaatcaaaag
cttggtattaacggtgaaaacatggtgtatttggatctatctcataaagatccgaaagag
ttagatataaagctaggcggaattattgagatttatgagaaatttgttggcgaagatcct
cgaaaagtgccgatgaaaatcttccctgctgtccattattctatgggtggactgtgggtt
gatattaatcaaatgactaatattcctgggatttttgctgcgggagaatgtgattattcg
cagcatggtgctaatcgacttggtgctaactcactattgtcggccatttatggtggggct
gttgctggtccaaaagcaatggagtatattgaaggtttagataaacatgtggatgatttg
tcagctaacttatttgaagaaaatgtaaaagttgaacaagataactttgataagttaatg
agcatggatggcgaagaaaatgcctatcaacttcataaagagcttggtcagtggatgacc
gacaatgttaccgtagtgcgtgagaataagaaattactagaaacagatgaaaagattcaa
gagctactacagcgttttgaaaacattaatattaatgatacatctcgttggagcaaccaa
ggtgtcatgtttacacgtcaactggaaaacatgcttcatctagctcgtgtcattacacaa
ggcgcttataatcgaaatgagagtcgcggtgcgcattataagccagaatttccggacaga
aatgatgaagactggttaaaaaccactattgcagagtttgatatggaagaaaaggcacca
aagttttcttatgaggatgtcgatatttcattaattaagcctcgtaagcgcgactacacg
aaaaaaagcgaagggagtaagtaa
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