Virgibacillus sp. 6R: BKP57_02310
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Entry
BKP57_02310 CDS
T04596
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BKP57_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_02310
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BKP57_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ATG17_like
MutS_III
SAM_Ribosomal_mS41
CdvA
DUF4398
Motif
Other DBs
NCBI-ProteinID:
API90787
LinkDB
All DBs
Position
complement(476802..479144)
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AA seq
780 aa
AA seq
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MNERMIRVLEFDKIIEQLINYAETSIGKQQMKQIRPATDMETVVRLQDETDEATHVERLN
KTLPLGGVFDIRPSLKRVSIGGVLTAGECIEVSSTIYGGRTAKDFMEELEEDLPILHAMV
EEITPLRHLEQAINRCVDDHGHVLDSASEKLRGIRSSIRTLESRVREKLDSFTRTHSNKL
SDAIITIRNDRYVLPVKQEYRASIGGIVHDQSASGQTLFMEPKAVVDINNQLQEAIVNEK
REIERILMELSSLIAEEAIPLEHNVHILGKMDVIFARAKYGQSIKGSKPMMNDRGIIKMK
QARHPLIDPREVVANDIELGERFTAIVITGPNTGGKTVTLKMVGLCSMMAQSGLQVPALD
GCKFGVFSHIFADIGDEQSIEQNLSTFSSHMTTIVEILKQVDEQTLVLFDELGAGTDPQE
GAALAMAILDEVIDRQARVIATTHYPELKAYGYNRKQVVNASVEFDVETLRPTYRLLLGI
PGRSNAFDISRRLGLSSKLIEHAKSYIGIDSKNVENMIASLEQSQNRAEKDYEQAHELLM
QAESLYQDLMNAWNEWQDKREKLYQKAEEKADKAIQRAREEAEIIVQEIRNMHREAEWKE
HEWIEAKKLLDSAKPELSTKKDVTPSSANKEVKELKPGDDIKLLTINQKGTVLEKINDHE
YLVQVGIMKVKVDRKDLQYMGKSKQKYEQPITTIKGSNYHVKTELDLRGERLEDALLKLE
KYMDDALLAGYPRVSIIHGKGTGALRKGVQEFVKQHPRISDSRPGSSGEGGSGVTVIRLK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcgcatgattcgcgtactcgagtttgataaaattattgaacaattaatcaac
tatgcagaaacatcgattggaaaacagcagatgaaacaaattcgtcctgccactgatatg
gaaacagtggttcgattgcaagatgagacggatgaagcaacccatgtagagcgcttaaat
aaaaccttaccacttggtggagtttttgatattcgtccaagcttaaaacgtgtttctatt
ggtggagtgttaaccgcaggagaatgtattgaagtatcgagtaccatttatggtggaaga
actgcgaaggattttatggaagaactggaagaagatcttcctattctacatgctatggtt
gaagaaattacgccattacggcatctggaacaagcgataaatcgttgtgtggatgatcat
gggcatgtactggatagtgcatcggaaaaattacgaggaattcgctcttccattcgaaca
ttggaaagcagagtgagagaaaagctggacagctttacaagaacccatagtaataaactg
tcggacgcgattataacaatacgaaatgatcgctatgttcttccagtaaaacaagaatat
cgtgcatctatcggaggcattgttcacgatcaatctgcctcgggacagacgttatttatg
gaaccgaaggcagtagtagatataaacaatcaattgcaagaagcgatcgttaacgaaaaa
agagaaatagaacgaattttaatggagcttagttcgctaattgctgaggaagcaattcca
ttagagcataacgttcatatacttggaaaaatggatgtcatttttgctagagctaaatat
ggtcagtcgattaaaggctctaagccaatgatgaatgaccgtggaattattaaaatgaag
caagcacgacacccattaatcgacccccgtgaagtagtggctaatgatatcgagctaggc
gagagatttacagcaattgtgattacaggtccaaatacaggtggaaaaacggtaacctta
aaaatggtcggtctttgttcgatgatggctcaatctggattacaagtaccggcattagat
ggttgtaaatttggagtgttttcccatatattcgctgatatcggtgatgagcaatccatt
gaacaaaatttaagtacattttcctctcacatgactaccattgtagaaattttaaagcag
gtggatgaacaaactcttgtgctgtttgacgagctaggggctggtactgatcctcaagaa
ggagcagctttagcaatggccattctggatgaagtcattgacagacaagcgcgagtaatc
gcgacgacgcattatccagaattgaaggcatacggttataatcgaaagcaagttgtaaat
gcttcggttgagtttgatgttgaaacgttgcgtccaacctaccgtttgttgttaggaatt
cccggtagaagtaatgcttttgatatttctagacgtttaggtctttccagtaagctaata
gaacatgcaaagtcatatataggaatcgattctaaaaacgtagagaatatgattgcttcc
ttagaacagtctcaaaatagggcagaaaaggattatgaacaggcacatgaactgctgatg
caagctgaatcattgtatcaggatctgatgaatgcttggaacgagtggcaagataaacgg
gaaaagctgtaccaaaaagcagaggaaaaagccgataaagctattcaaagagcgcgtgaa
gaagctgaaataatcgttcaagaaattcgtaacatgcatcgtgaagcggaatggaaggag
catgagtggatcgaggctaagaagctgcttgactccgctaaacctgagctatctacgaaa
aaagacgtaaccccatcctcagctaataaagaagtaaaggaattaaagccaggtgatgat
attaaactgctaaccattaatcaaaagggaaccgtactagaaaaaatcaatgaccatgaa
tacttggtccaagttggaattatgaaagtaaaagtagatcggaaagatttacaatatatg
ggtaaatcaaaacagaaatatgaacaaccaattacaacaataaagggtagtaactaccat
gtgaagacagagctggatttacgtggggaacggttagaagatgcattattaaagctggag
aagtatatggatgatgcgctactagcaggttatccgagggtttctattattcatggtaaa
ggtacaggagcacttcgtaaaggggtacaggaattcgtcaagcagcatccaagaatttct
gattctagacctggatcatctggagaaggcggcagtggggtaactgtcattcgtttaaaa
tag
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