Virgibacillus sp. 6R: BKP57_02335
Help
Entry
BKP57_02335 CDS
T04596
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BKP57_02335
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vig01007
]
BKP57_02335
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vig03016
]
BKP57_02335
Enzymes [BR:
vig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BKP57_02335
Amino acid related enzymes [BR:
vig01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BKP57_02335
Transfer RNA biogenesis [BR:
vig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BKP57_02335
Prokaryotic type
BKP57_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
DUF1186
Motif
Other DBs
NCBI-ProteinID:
API90791
LinkDB
All DBs
Position
complement(483774..486200)
Genome browser
AA seq
808 aa
AA seq
DB search
MLVSLNWLKNYVDITDVSPEELANKITKSGIEVDGIEYVAEKSENVVIGYVVSCEKHPNA
DKLHLCQVDVGDETLQIICGAPNVAQGQKVAVAKPGAVLPGNFKIKRVKLRGVESNGMIC
SLQELGIEEKYVPKDVADGIYVFPTDVTVGESVEPLLNLNDAVLEFDLTPNRADCLSMLG
VAYEVGAILNREVRLPNPEPTMATGAANDYIAVQVEAPNANPYYGAFVIRNVTIQPSPLW
MRNYLIAAGIRPINNVVDITNYVLLEYGQPLHAFDYDKLQSDKIVVRHAKEKETIITLDE
QERVLSKDHLVITNGKEPIALAGVMGGLSTEVTDTTKNILLEAAYFDPAIVMNAVKATGL
RSESSTRFTKGVDPNRVKEAGLRACELLEKYANATVAKGVVAFDELNRGQKQVEINIDEI
NKRLGTSLVTSDVEDALKRLQFEFEPKGNEYLVHIPTRRGDITIFEDMLEEVARIYGYDK
LPYTLPVGAGQAGGLTERQLLLRKIKHLMEASGLLESRTYTLISEAAANTLISPELAEAN
YVPIELALPMSADHKFLRISLLPEILRVLAHNRARNQFDLGYYEIGKTFLTTEKTLTKQP
EERLRLAGAITGNWIHHPWQQESKQVDFYVVKGILEKLFTFLGCSVAFQPLKHQDMHPGR
TASLQLEGRTIGFVGQLHPHLQNQLDLKETYVFDVNMEELLSAYNEEPSYQEIPKYPSID
RDIAFVLDSSVLAAEVKQVIMDVGAPLVKHVSVFDVYEGEHLKAGKKSVAFHLVYQHPEK
TLTDDEVQASYEQIITAVKDKFAAYIRS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgttagtatcattaaattggttaaagaattatgtagatataacagatgtaagtccagaa
gaattagcaaataaaattacaaaatcagggattgaagtcgatggcattgaatatgtagcc
gaaaaaagtgaaaatgtcgttattggctatgttgtatcttgtgaaaagcatccgaatgct
gacaaacttcatttatgccaagtagatgttggagatgagacgttacaaattatatgtgga
gctccgaatgtcgcccaaggtcaaaaagtagcagttgcgaagccaggcgctgttcttcct
gggaacttcaaaattaaacgggttaaattacgcggtgtcgaatctaatggtatgatctgc
tccctgcaagagctaggcattgaagaaaaatatgtaccaaaagatgtagctgacggtatc
tatgtatttccaactgatgtgaccgttggagagtcagtagagcctttactaaacttgaat
gatgcggttctggaatttgacctaaccccaaatcgtgcggattgcttgtcgatgttagga
gtagcctatgaagtgggagctattttaaatagagaggtacgcttgccaaatccagagcca
acgatggcaacaggtgctgccaatgactatatcgctgttcaagtagaggcacctaatgca
aacccgtattatggcgcttttgttatacggaacgtaactatacagccatctcctttatgg
atgcgaaattatttaatagcagctggcattcgcccgattaataatgttgttgatataacg
aactatgtgttgctggaatatgggcagccactgcatgcttttgattacgataaattacaa
tcggataaaatcgttgttcgtcatgcgaaagagaaagaaaccattattacattagatgag
caggaacgagttttatctaaagaccatttagttattaccaatggaaaggaaccaattgct
ttagcaggtgtaatgggtggtctatctacggaagtaacggatacgacgaagaatattttg
ctggaagcagcttattttgatccagctatagtcatgaatgccgtaaaggcgacgggtctt
cgaagcgagtccagtacacggtttacaaaaggggtcgatccaaaccgggtaaaagaagcg
gggcttcgtgcatgcgaattactggaaaaatacgcaaatgcaacggttgcaaaaggggtt
gttgcgtttgatgaactaaatcgtgggcaaaaacaagtagaaataaatatagatgaaatc
aacaaacgacttggtacatcattagtgacctcagatgtagaagatgctttaaagcgcctg
cagtttgaatttgaaccaaagggcaatgaatatcttgttcacattccgacacgtagaggc
gatattactatttttgaagatatgttagaagaagtggcacgtatctacggttatgataaa
ctgccgtatacattgccagtaggagcagggcaggcaggtgggctcacagaaaggcagcta
ttacttcgcaaaataaagcacctcatggaagcttccggattattagaaagtcgcacctat
acgttaatcagtgaagcagcggctaatactttaattagccctgagttagcggaagcaaac
tatgtaccgattgaattagctttaccaatgagcgcagatcataaatttttgcgaataagc
cttttaccagaaatccttcgtgtgttagctcataatagagctcgtaatcaatttgattta
ggttattatgaaattgggaaaacatttttaactaccgaaaaaacgttaacgaagcaaccg
gaagagcgactccgtttggcgggagctataaccggaaattggattcaccatccgtggcag
caagaaagtaaacaagtagatttctatgttgtcaaaggcatattagagaaattatttact
tttcttggttgttccgtagctttccagccattaaaacatcaggatatgcatccaggaaga
acggcttcacttcagttagaaggaagaacaattggatttgttggccagttgcatccacat
ttgcaaaaccaattagatttaaaagagacgtatgtatttgatgtaaatatggaagaatta
ttgagcgcgtacaatgaagaaccttcttatcaagagattcctaagtatccttccattgat
cgagatattgcttttgtacttgatagcagcgtgcttgcagctgaagtaaagcaagtaatt
atggatgttggtgctccgttagttaaacatgtatctgtctttgatgtttatgaaggagaa
catttaaaagctgggaagaagtcagtagcctttcatttagtttatcagcaccctgaaaaa
acattgaccgatgacgaggtccaagcttcttatgaacaaattattactgcagtgaaagat
aaatttgctgcctatattcgctcttaa
DBGET
integrated database retrieval system
