Virgibacillus sp. 6R: BKP57_02485
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Entry
BKP57_02485 CDS
T04596
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03030
DNA replication
vig03410
Base excision repair
vig03420
Nucleotide excision repair
vig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKP57_02485
03410 Base excision repair
BKP57_02485
03420 Nucleotide excision repair
BKP57_02485
03440 Homologous recombination
BKP57_02485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vig03032
]
BKP57_02485
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_02485
Enzymes [BR:
vig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKP57_02485
DNA replication proteins [BR:
vig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BKP57_02485
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BKP57_02485
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKP57_02485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
XPG_I
HHH_5
HHH_2
Enkurin
Motif
Other DBs
NCBI-ProteinID:
API90817
LinkDB
All DBs
Position
complement(515526..518165)
Genome browser
AA seq
879 aa
AA seq
DB search
MSNKLVLIDGNSIIYRAFFALPLLNNDKGVYTNAVYGFTTMLLRMIEEEKPTHMLVAFDA
GKTTFRHETYKEYKGGRQKTPPELSEQFPLLKEVLDAFSITHYELDNYEADDIIGTLSKK
VEKDDWEVTIISGDKDLLQLVSDRVTVNLTKKGISEVEKYTPDFVLEKMEITQEQIIDLK
ALMGDNSDNIPGVPGVGEKTAVKLLKQFDTLENVYEHLDEVSGKKLKEKLANHKEEAFMS
KKLVTINRSSPITIEPDDVKYNGYAHDKVRAVFTELGFQSLLTRIQGTKENNTESGYQQA
PIDFSVMDEVNEEMFTGEEALIVELLEENYHQAAIQGFSIVNNKAAFFLPTDVALQSDLF
KAWLEDSSKKKYVFDAKKTLVSLLRAGVHIKGIAFDMLLASYLINPSENNHDIPAISHRF
GRTDVYMDEEVYGKGAKLKLPEQSVFAEHIVRKATMLYELRPQMEKQLKENEQYELFKEL
EMPLALILGEMEHTGVLVDTKRLEEMRIDLKNRLAELEEEVHALAGEPFNLNSPKQLGPI
LFEKLGLPVIKKTKTGYSTAADVLEQLQDEHEIIPKLLLYRQLGKLQSTYIEGLLKVVDE
KTNKIHTRFNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFIPAEEGWVMFAADYSQI
ELRVLAHIAGDEKLMAAFKQQADIHTQTAMDVFHVDKGEVTANMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKGAKQFIDRYFESYTGVKTYMEEIVQEAKHQGYVSTIMNRRRYLPDIT
SRNFNQRSFAERTAMNTPIQGSAADIIKKAMIDLHEKLKKEQLQARILLQVHDELILEAP
QSEIETLKEIVPAIMENTVELNVPLKVDYAYGDSWFDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaattggttttaattgacgggaacagtattatttaccgcgcattcttcgcg
ttaccgcttttaaataatgataaaggtgtatacacaaatgctgtgtacggttttacgact
atgttgttaagaatgatagaggaagaaaagcctacgcacatgttggttgcgtttgatgca
ggaaagaccaccttccgacatgagacatataaagagtataaaggtggaaggcaaaaaacc
ccacctgagctatcagagcagttcccgctactcaaagaagtactggacgcattttccata
acgcattacgaattagataattatgaagcagatgatattattgggacattatcgaagaaa
gtagaaaaagatgactgggaagtaactattatttctggtgataaagacttgcttcagtta
gtatcagatcgtgttaccgtgaatttaaccaaaaaagggattagcgaagtggaaaagtat
acccccgattttgttcttgaaaaaatggagattactcaagagcaaatcattgacctaaaa
gcgttgatgggtgataactcagataatattcctggtgtaccaggagttggtgaaaaaaca
gcagttaaattattaaagcaatttgatacattggaaaatgtgtatgaacatttggatgag
gttagcgggaaaaaacttaaggaaaagttagcaaaccataaagaggaagcgtttatgagt
aagaaacttgtaacgattaatcgctcttcacctattacgattgagccagacgatgtcaaa
tataatggatatgctcacgataaagtgagagccgtttttacagaactggggtttcagtct
ttattaactcgcattcaaggtacaaaagaaaataataccgaatcaggctatcaacaagct
cctattgatttttcagtaatggatgaggttaacgaagaaatgtttacaggagaagaagca
ttgatcgttgaactgttagaggagaactaccatcaagcagccattcaaggattttccatc
gttaataacaaagctgccttctttttacctactgacgtagcattacaatcagatctgttt
aaggcatggttggaggattcaagcaaaaagaaatatgtgtttgatgcaaagaaaacgtta
gtttccttattgcgagctggagtgcatattaaaggtattgcgtttgatatgctattggct
tcctatttaatcaatccatcggaaaataatcatgatattcctgcgattagccatcggttt
ggcagaacagatgtttacatggatgaagaagtatatggcaaaggagcgaagctgaagctt
cctgaacagtctgtttttgcagagcatatagttagaaaagctaccatgctttacgaactg
agaccgcaaatggaaaagcagcttaaagaaaatgaacagtacgaattattcaaggaatta
gagatgccattagcccttattcttggagagatggagcatacaggggtgcttgtggataca
aagcgtttagaggaaatgcggatagatttaaaaaatcgtttagctgaactagaggaagag
gtacatgcgttagctggcgaaccgtttaatttaaattccccaaagcaattaggtccgatt
ttatttgaaaagctaggtctgccagttattaagaaaacgaaaacgggatattctactgca
gcggatgtattagagcaacttcaggatgaacatgaaatcattccaaagctcttattgtat
cgccaattaggtaaattacagtccacttatattgaaggcttattaaaagtagtcgatgaa
aaaacaaataaaattcacactcgttttaatcaagctttaacgcaaacaggtcgtttaagc
tccattgagccaaatttacaaaatatccctattcgactagaagaaggaaggaagattcgg
caagcttttatcccggcggaagaaggctgggttatgtttgcagccgattattcacaaatt
gagttaagggtattagcacatattgcgggtgacgaaaaattaatggctgcatttaaacag
caagcagatattcatacccaaacagcgatggatgttttccatgtagataaaggtgaggtg
acagcaaatatgcgaagacaagcaaaagctgttaacttcggtattgtatatggaattagt
gattatggattatcacaaaacttaggtattacgcgaaaaggagccaagcagtttattgat
cgttatttcgaaagctatacaggtgtaaagacgtatatggaagaaatcgttcaagaagca
aagcatcaaggctatgtgagtactataatgaatcggagaaggtatttgcctgatattact
agtagaaactttaatcaaagaagttttgccgaacgaactgctatgaatacaccaattcag
ggaagcgctgcggatattattaaaaaagcgatgattgatctacatgagaagctaaagaaa
gagcaacttcaagcaagaattttattacaagttcatgacgaattaattttagaagcacca
cagtcagaaatagaaacattaaaagagatagtaccagctattatggaaaatacagtagag
ttgaatgtacctttaaaggttgattatgcttatggagatagttggtttgatgctaagtaa
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