Virgibacillus sp. 6R: BKP57_05370
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Entry
BKP57_05370 CDS
T04596
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig00250
Alanine, aspartate and glutamate metabolism
vig00310
Lysine degradation
vig00350
Tyrosine metabolism
vig00650
Butanoate metabolism
vig00760
Nicotinate and nicotinamide metabolism
vig01100
Metabolic pathways
vig01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BKP57_05370 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BKP57_05370 (gabD)
00310 Lysine degradation
BKP57_05370 (gabD)
00350 Tyrosine metabolism
BKP57_05370 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BKP57_05370 (gabD)
Enzymes [BR:
vig01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BKP57_05370 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BKP57_05370 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BKP57_05370 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
API91322
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Position
1196814..1198274
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AA seq
486 aa
AA seq
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MFNAYTKSIFINGSWQEINENATETVYNPATGSPITSVAYAGAKETDQAIAAALQAFPMW
SEKTGRERSTFLYKAYQLMLEEVERLAEIVTMEQGKPLREAMDEVKGAAQFLLWYAEEAS
RNYGEWLPSSLKSKRMVVVPQPVGVVGAITPWNFPSSMITRKLAPALAAGCTAVLKPAPE
TPLSAIEIIKIFARAGMPNGVVNLVTGDAQAIGHQLLTNKDVRLITFTGSTAVGKHLMRE
SAEHVKKLSLELGGHAPGIVFPDADLNKAASLVLASKFRNNGQTCICTNRLFVHESVVSD
FVQLLKHNIANLKLGNGLEKETDIGPLINQQACEKVAAHVHNAIEKGAVTEYGGQRWHQQ
GLSEYYFEPTILSNVTDDMKIMHEETFGPVLPIQTFSDETEVIAKANDTDYGLAAYIFTE
NTSIAIRVSEKLDYGIVGVNDVFPASPEAPFGGIKQSGLGKEGGHHGMDEFMEKKLISFG
IKSSVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgcttatacaaaaagtatttttattaatggtagttggcaggagatcaacgaa
aatgcaacagaaacggtttataatccagctacaggaagtccaattacatctgttgcttat
gcaggagcaaaagaaacggatcaagccatcgctgctgcccttcaagcatttccaatgtgg
agtgagaaaaccggtagagagcgctcgactttcctatacaaggcttatcagcttatgcta
gaggaagtggaaagacttgccgaaatcgtaacgatggaacagggaaaacctcttcgtgaa
gcaatggacgaagtaaaaggagcggcacaatttttactatggtatgcagaagaagcaagc
agaaattacggtgaatggcttccctcgtcgctaaaatccaaaagaatggttgtcgttcca
cagccagttggtgtggttggtgctataacgccatggaactttccatcttctatgattaca
aggaagcttgcacctgcattggcagcagggtgtacggctgtactaaaacctgcacccgag
acaccattatccgcaattgaaattataaaaatatttgcacgtgctggaatgcctaacggg
gtagttaatctcgtaacaggggatgcacaagctattggtcatcagttacttacaaataaa
gatgtccggttaattacttttaccggttccacagctgttggtaaacatttaatgcgagaa
agcgccgaacatgtaaagaaactttccttagagttgggtggtcatgctcctggcatcgtg
tttccagatgctgatttaaacaaggccgcatcactcgttctcgcaagcaaatttcgcaat
aacgggcaaacttgtatttgcacaaatcggctattcgttcatgaatccgtagtttctgat
tttgttcaattattaaagcacaacatagccaacttaaaactggggaatgggttagaaaag
gaaacggatatcggtccattaattaatcagcaagcatgcgaaaaagtagcagcacatgtc
cataacgcgattgagaaaggtgctgtaaccgaatatggcggacagcgctggcatcaacaa
gggctatctgaatattatttcgagccaactattctctccaacgtaacagatgacatgaag
attatgcatgaagaaacgtttggaccagtattgccaattcaaaccttctctgacgagaca
gaagtgattgctaaagcaaacgataccgattacggtttagccgcttatatttttaccgaa
aatacaagcattgctattcgtgtctctgaaaagcttgattacggaattgttggggtcaat
gatgtatttcctgcgtctccagaagcgcctttcggtggtataaagcagtctggtttgggt
aaggagggcggacatcatggtatggatgaattcatggaaaagaaactgatttcttttggc
attaaatcatccgtccattaa
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