Virgibacillus sp. 6R: BKP57_05965
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Entry
BKP57_05965 CDS
T04596
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03420
Nucleotide excision repair
vig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKP57_05965
03430 Mismatch repair
BKP57_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_05965
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKP57_05965
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKP57_05965
MMR (mismatch excision repair)
Other MMR factors
BKP57_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
API91428
LinkDB
All DBs
Position
complement(1334417..1336636)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTKETLLKGLNQQQREAVIHTDGPLLIMAGAGSGKTRVLTHRIAYLLAEKDVAARNVL
AITFTNKAAREMKERVRRLVGPESEYMWVSTFHSMCVRILRRDIDRIGYNSNFTILDSSD
QLSVIKQVLKNLNIDPKKFEPRAMLGQISAAKNELITPEEYNKQVGNFFERQVGQVYEAY
QKMIVKNQSLDFDDLIMQTIHLFKRVPEVLEYYQRRFQYIHVDEYQDTNHAQYSLVKMLA
SRYQNLCVVGDSDQSIYRWRGADIANILTFEKDYPASRTILLEQNYRSTKSILAAANHVI
ANNTGRKPKKLWTENDDGKQIHYFQGATEQEEALFVTEKIQQLTREEGYSPSDVAILYRT
NAQSRAIEDTLVKSNMPYQMVGGTKFYERKEIKDIIAYLRLIANPDDDLSFERVVNVPKR
GIGKTSIERLREYASIHDISFNQAVKEVDFTGVSKKAANALAEFSSLMQSFAQQQEFLTA
TDMVEAVLERTGYETMLKNERSLEAQSRLENLEEFMTVTKDFEAVSEDKSLVAFLTDLAL
IADIDQVDEAETEAEDKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSMFDEEEMEEER
RLAYVGITRAEKELYLTHARMRTLFGRTNMNPISRFINEIPEELMAGIEVANTSMFGESR
ESNISRTAPMKRKAQHMPKTSGAENETWSPGDKAKHKKWGVGTVVRVNGEGEAMELDIAF
PAPVGIKRVLAKFAPITKE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacgaaggaaacgctattaaaagggttaaatcagcaacaacgagaagcggtt
atccatacagacggtccactgctcataatggcaggtgctgggagtgggaaaacacgtgta
ttaacacatcggattgcatatttgttagcagaaaaggacgttgcagcacgcaatgtgcta
gcgattacgtttacgaataaagctgcccgagaaatgaaagaacgtgtaagaagattggtt
ggtcctgagagtgaatacatgtgggtatcgacctttcactccatgtgtgtacgaatttta
cgaagagatatagaccgaattggttataacagtaattttacgattttagatagtagcgat
cagctgtctgtcattaaacaggtacttaaaaatttgaatattgacccgaaaaaatttgag
ccaagagcgatgcttggtcaaatcagtgcggccaaaaatgaacttatcacacctgaagaa
tataataagcaagttggcaatttttttgaacggcaagtaggacaggtttatgaggcgtac
caaaaaatgattgtaaaaaatcagtcgcttgattttgatgatttaattatgcaaacaatt
catttatttaaacgtgtgccagaagtactggaatattatcagcgccgctttcaatatatt
catgtggatgagtatcaggataccaaccacgcacagtactctctcgttaaaatgctagca
agccgctatcagaatttgtgtgttgttggagattcggatcagtcgatttatcgttggcgt
ggtgccgatatcgccaatatccttacttttgaaaaagactatccggcgtcaagaaccatt
ttattggaacaaaattaccggtcaacgaaatcgattttagctgccgcaaaccatgtaatt
gcaaacaacacgggtagaaaaccaaagaagctttggacagaaaacgatgacggaaaacag
attcattattttcaaggtgcaacggagcaggaagaagctttatttgtcacggaaaaaatt
cagcaattaacccgagaagagggatattctccaagcgatgtggcgatactgtatcgaacg
aatgcgcaatcacgtgcgattgaggatacgttggtcaagtcaaacatgccataccaaatg
gtgggcggaactaaattctacgagcgaaaagaaataaaggacatcattgcttaccttcgt
ttaattgccaatccagatgatgatttgagctttgaacgagtggtcaatgtcccaaaacga
gggattgggaaaacgtcgatcgaacggttgcgggaatatgcttctatccatgacatttca
ttcaaccaagcggtgaaggaagtcgactttactggtgtttctaaaaaagcagctaatgct
ctggctgaattttccagcctcatgcaatcttttgctcagcaacaggagtttttaaccgca
acagatatggtagaagctgttttagaacgaactgggtacgagacgatgttaaaaaatgaa
cgatcgcttgaagcgcaaagcagacttgaaaacttagaagaattcatgaccgttaccaag
gattttgaagcagtcagtgaagataaatcgctcgtcgcctttttaaccgatttagcgtta
attgcagatatcgatcaagtcgatgaagctgaaacggaggcagaagataaaatcacgctc
atgacgctgcatgcagcgaaaggcttagaatttccagttgtctttttaattggtatggaa
gagaatgttttcccacatagtcgttcgatgtttgatgaagaagaaatggaagaagaacgc
agattagcatatgttggtattactcgtgcagaaaaggaactataccttacgcatgcacga
atgcgaaccttatttggacgtacaaatatgaatccgattagccgctttattaatgaaatt
ccggaagagttgatggcaggaatcgaggttgctaacacttctatgtttggtgaaagcaga
gagtcaaatataagcaggacggcaccaatgaagcgcaaagcgcagcatatgccgaaaact
tcaggtgctgaaaacgaaacatggtcccctggtgacaaagccaagcataaaaaatggggt
gttgggactgttgtaagagtaaatggcgaaggtgaagcaatggagttagatattgcattc
cctgcacctgttggcattaaacgcgtgctggcaaaatttgcaccaattacgaaagagtag
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