Virgibacillus sp. 6R: BKP57_06535
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Entry
BKP57_06535 CDS
T04596
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03420
Nucleotide excision repair
vig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKP57_06535
03430 Mismatch repair
BKP57_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_06535
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKP57_06535
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKP57_06535
MMR (mismatch excision repair)
Other MMR factors
BKP57_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
API91525
LinkDB
All DBs
Position
1461871..1463781
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AA seq
636 aa
AA seq
DB search
MSIIRDIIITDEDIDWVEKIMGEDITFDSERRNIIKNLESTDIQAFPGSGKTTVLVAKLA
ILAQKWDFSTSGICVLSHTNVAREEIEKRLGNTSVGAKLLKYPHFIGTVHSFFTTYIASP
WVKSQGKKIEIIETDLTTAYRWNKILPFYKDIFEKKFITENNCSYKGAIGTLELGNYKPN
SKPYKHVKNIVNSSQKSGYFTFDEMLLFAKEALEDAPSISKITSKRFPIVFIDEAQDTND
FQYNLIDKCFNESIQQGFGDENQAIYNYVGESNSVRFPRDAPLVIQQSKRFSNNIAQLAN
PLAISKLKMLGINNEFNNSKHSIFVFNKNKVEDVLSEYGKLILETFTDEELERYQTDGCF
AVGLVHNKKAETKEEHFPKGVYDYWPAYKSKPVSKGYNPKYLIDYFRLGYQELLHTKDTY
KQITWILSGLRKIINEEMNEIYLPNRKNLMKSFSDCLESEEHIQIFRQCMLNLQKAKFDT
KNNWNITLEHITLLLGLFGITISNLEFSKWTELKDISLESVESLKDYSTNTFHYEYDNRK
VAINLDSIHGVKGKTHLSTLILETFRNSHRLKNILPFFYDSTCKKKVPQSKIDNLKCHYV
AMTRPRGLLCLAIPFEKISAAEIKKLHTMGWNIIFV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagtataattcgtgatattattattactgatgaggacattgattgggtagaaaaaatt
atgggtgaggatataacttttgattctgagagaagaaatataattaaaaatttagagtca
acagacatacaagctttcccaggtagtggaaaaacaactgttttagtagccaaactggcg
attttagcccaaaaatgggatttttctacttcaggtatatgtgttctttcacatacaaat
gtagctagagaagagattgaaaaaagattaggtaatactagtgtcggggctaaattatta
aaatatccacattttattggtaccgttcattcatttttcactacatatatagcttcacca
tgggtgaaatctcaaggtaaaaaaattgaaattattgaaacagatttaactactgcatat
agatggaataagattttacctttttataaagatattttcgaaaaaaaatttataactgaa
aataattgcagttacaaaggggctattggcactttagaattaggtaattataaaccgaac
agtaaaccttataagcacgtaaaaaatatagttaattcatcacaaaagagtggatatttt
actttcgatgaaatgttactttttgcgaaagaagctttagaagacgcaccttctatttcg
aaaattacatctaaaagatttccgattgtttttattgatgaagctcaggatactaatgat
tttcagtataatttaattgataaatgttttaatgaatccatacaacaaggctttggagat
gaaaatcaggcgatatataactatgtcggagaaagtaattcagtaagattcccaagagat
gcgccattagttattcaacaaagcaaaaggttttcaaacaatatagcccaattagccaat
ccattagctatttccaaattaaaaatgcttgggataaataatgaatttaacaatagcaaa
cactctatttttgtttttaataaaaataaagtagaagatgtgctctccgagtacgggaaa
ctaattttagaaacttttactgatgaagaattagaacgatatcaaacagatggttgtttt
gctgtaggtttagttcataacaagaaagcagaaactaaagaagaacattttcccaaaggt
gtctatgattactggccagcctataagtcaaagcccgttagtaaagggtacaaccctaaa
tatctgattgattatttcagattagggtatcaagaattacttcacactaaagatacttat
aaacaaattacatggatattatctggactacgcaagataattaatgaggaaatgaacgag
atttatctacctaatcgaaaaaatcttatgaaatctttttcagattgcttagaaagtgaa
gaacatattcaaatttttcgtcaatgcatgcttaatctacaaaaagcaaagtttgataca
aaaaataattggaatataaccttggaacatattactttgcttcttggtctatttggcatt
actatttctaatttagagttcagcaaatggacagaattgaaagatatctctcttgaatct
gttgaaagtttaaaagattactcgacgaatacatttcattatgaatatgacaacagaaaa
gtagccataaatctggacagtattcatggagtaaaaggaaaaactcatttatctacatta
atattggagacttttagaaacagtcatagattaaaaaacatactaccatttttttacgat
agtacatgtaaaaaaaaggtgcctcaaagtaagattgataatttaaaatgccattatgtt
gccatgacaagaccaagaggtttattatgtctggcgattccatttgaaaaaataagtgca
gcagaaataaaaaaattacatacaatgggttggaatattatttttgtatag
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