Virgibacillus sp. 6R: BKP57_07265
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Entry
BKP57_07265 CDS
T04596
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vig03021
]
BKP57_07265
Transcription machinery [BR:
vig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKP57_07265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
RE_TdeIII
HTH_23
HTH_3
DUF134
HTH_28
IF2_N
LppA
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
API91639
LinkDB
All DBs
Position
complement(1618257..1619048)
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AA seq
263 aa
AA seq
DB search
MTTKSQPHNSGRDEVYQLIESLQKKPTDEQLQEQLVLKYKDLVESIARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDSTFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
KAVDVLTMENQSSPSIKQIADYLQVTEEDILETMEMGKSYKALSVDRKVEADSDGSTVAI
LDLVGKEETGYEQTDQRMLLEKIFPILSEREQKILQYTYFENKSQKETGELLGISQMHVS
RLQRRSLRKLREAIQSENSEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaatagcggaagagatgaggtttaccaattaattgaa
tcattgcaaaaaaagcctactgatgagcagctacaggaacaacttgtactcaaatataaa
gatcttgtagaatcaattgcacgtaaatactcgaaaaatagtgcaattcatgaagacctt
gtccaagtaggtatgatcggtttacttgctgcagtccgccggtatgattcaacgttcggt
aaatcttttgaatcttttgcgatacctactattatcggtgagataaaaagatttataaga
gataaaacatggagtgtacatgttcctagacgtattaaagaattaggtcccaaaataaaa
aaagccgtcgatgttttaacgatggaaaatcaatcttccccctccattaaacagatagca
gactatttgcaagtgacggaagaagatatcttggaaacaatggaaatggggaaaagttat
aaagcactttctgtagatcggaaagtagaggcagattccgatggcagcacagttgctata
ttagatttagttggcaaagaagaaacgggatatgaacagacggatcagagaatgcttttg
gaaaaaatatttccgatattgtctgaacgtgaacagaaaatcttacaatatacctatttt
gaaaataagagccaaaaggaaactggtgaattactaggcatatcgcaaatgcatgtttca
cggttgcaacgacgttcattgcgtaaattgcgagaagcaattcagtctgagaattcggag
gtctttgattaa
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