Virgibacillus sp. 6R: BKP57_08295
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Entry
BKP57_08295 CDS
T04596
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig00260
Glycine, serine and threonine metabolism
vig00460
Cyanoamino acid metabolism
vig00630
Glyoxylate and dicarboxylate metabolism
vig00670
One carbon pool by folate
vig00680
Methane metabolism
vig01100
Metabolic pathways
vig01110
Biosynthesis of secondary metabolites
vig01120
Microbial metabolism in diverse environments
vig01200
Carbon metabolism
vig01230
Biosynthesis of amino acids
vig01240
Biosynthesis of cofactors
vig04981
Folate transport and metabolism
Module
vig_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BKP57_08295
09102 Energy metabolism
00680 Methane metabolism
BKP57_08295
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BKP57_08295
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BKP57_08295
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BKP57_08295
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BKP57_08295
Enzymes [BR:
vig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BKP57_08295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
API91827
LinkDB
All DBs
Position
complement(1856108..1857355)
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AA seq
415 aa
AA seq
DB search
MDFVKQADIEIFQAIEAEKKRQQDNIELIASENFVSEAVMEAMGSVLTNKYAEGYPGKRY
YGGCEHVDVAENLARDRAKQLFGAEHVNVQPHSGAQANMAVYFTVLEPGDTVLGMNLNHG
GHLTHGSPVNFSGTLYRFIDYGVDKETEQLDYDVVLKIAEKEKPKLIVAGASAYSRLIDF
AKFREIADKVGAYLMVDMAHIAGLVATGLHPNPVPFADFVTTTTHKTLRGPRGGMILCKE
EYAKKIDKAVFPGMQGGPLMHIIAAKAVSFKEALSDSFKTYSKQIIENAKVLAESLQSEG
IRIVSGGTDNHLLLLDVTPLGLTGKVAEHVLDSIGITTNKNTIPFDTESPFVTSGVRIGT
AAVTTRGFGKTEMEEIASIMAITLKNHDDAKVLEAAAQRVKTLTEKFPLYAVYAQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtcaagcaagcagatatcgaaatttttcaagcaatagaagcagaaaagaag
cgacaacaagataatattgaattaatcgcttctgaaaattttgtctctgaagcagtgatg
gaagcaatgggatctgtgttaaccaataaatacgcagaaggttatccgggcaaacgttac
tacggaggttgtgagcatgtagatgttgcagagaatttagctcgtgatcgtgcgaagcag
ttgtttggcgctgagcatgtcaacgtacaaccgcattcaggtgcgcaagcaaatatggct
gtttattttactgttttagagcctggtgataccgtgttaggtatgaatcttaatcacgga
ggacatttgacacacggaagcccggttaatttcagtggtacactttaccgttttatcgat
tatggggttgataaggagacggagcagttagattatgatgttgttttaaaaatagctgaa
aaagaaaaaccgaaacttattgtagcaggtgccagtgcatattcacgacttatcgatttt
gcaaaatttcgcgagatagctgataaggtaggagcttatttaatggtcgatatggctcat
attgctggattggtagctactggtttacatccgaatccagttccttttgctgattttgta
acaacgacaacgcataaaacattacgtggcccaagaggtggtatgattctttgtaaagaa
gaatacgctaaaaagattgataaagctgtatttcctggtatgcagggcgggccgttaatg
catattattgcagcaaaagcagtttcctttaaggaggccctatctgattcgtttaaaacg
tacagcaaacaaatcattgaaaatgctaaggtgttagctgaatctctacagtctgaggga
attcgtattgtttctggtggtacggataaccatttgctattgcttgatgtaacaccgtta
ggattaacagggaaagtagctgagcacgtactggattccattgggattactaccaataaa
aataccatcccatttgatacagaaagtccatttgtaacgagtggtgtgcgtataggtaca
gcggcagttactacccgtgggtttggaaaaacggaaatggaagaaatagcctcaatcatg
gcaatcacgttaaaaaatcatgacgatgctaaagtgctcgaagcagctgcacaacgtgtg
aaaacactaactgaaaaattcccgctttatgcggtatacgcgcaataa
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