Virgibacillus sp. 6R: BKP57_13570
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Entry
BKP57_13570 CDS
T04596
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03420
Nucleotide excision repair
vig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKP57_13570
03430 Mismatch repair
BKP57_13570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_13570
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKP57_13570
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKP57_13570
MMR (mismatch excision repair)
Other MMR factors
BKP57_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
DEAD
SLFN-g3_helicase
NACHT
Vmethyltransf
Motif
Other DBs
NCBI-ProteinID:
API92744
LinkDB
All DBs
Position
3001400..3003700
Genome browser
AA seq
766 aa
AA seq
DB search
MTQMHQDFPYEQRRVDHIHEEIKQKELKIAAKTSHLKQDVIELRKTFWDDVTVNLDEPDD
VIETEASIKQQAELLTQKETIHGSLAKELRTLNRLKDNPYFGRIDFTEDGEEKESIYIGI
ASLMDSAEDNFLIYDWRAPISSLYYDYALGSASYQTLDGDVSGEISLKRQFIIRNGVIKA
MFDTGLTIGDQLLQEALGNNASTTMKSIVATIQKEQNKIIRNEKSKLLVVQGVAGSGKTS
AALQRIAYLMYRYRKQLNPENVMLFSPNPLFSSYIRNVLPELGEENVRQTTFYYFVEEKT
GEEFSIESPFTQMEYMLTNKGTTDGQIRMQGIAYKSSLAFKEVIDNYVACLYISGVCFKP
VVFRNQVIISNEAIANYFYSLDSSVSLFNRMELVANWLLKELALIQKREVSKDWVEEKIE
LLDKEAYAKAYYKAQKQAAGSVVDEEMILRKAVVSKMFARIKKRIKQYAFVDVPKTFAQL
FKHQEQQKDLPTEWNDIAAQTIKNIQSNILGWEDAAPYAYFKGKLLGDMADRSVRYLVID
EAQDFSAFQFAYIKELFPHTRMTLLGDVNQAIYNPISKQNPLLLDEKNDVERITLTKSYR
PTKQLVQFTRHFAPGKDVIEPFEREGNKPKLVDVKEENQLVEVLINEVQELFQKGYETIA
LVTKSIQESKQLYKTLKGKIDCILVDEETYTFTKGILIIPVYLAKGIEFDAVVIPDATNK
HYTKEDQILFYTACTRAMHELSIMVTGEPTAFIKETPKNTYQMTEI
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaatgcaccaggattttccttatgaacaacgacgtgtagaccatattcacgag
gaaataaagcaaaaagagttaaaaatagcggctaaaacatcgcacttgaaacaagacgtc
attgaattgcgaaaaacgttttgggatgacgtgactgtaaatttggatgagcctgacgat
gtgattgaaacagaagcaagcattaaacagcaagcagagttattgacgcaaaaagaaacc
attcatggcagtttagcgaaagaattaaggacattaaatagacttaaagacaatccttat
tttggtcgaattgattttacagaagatggtgaagaaaaagagtctatttatattggcatt
gcttcgttaatggatagcgccgaagataattttcttatctatgattggagagccccaata
tcaagtctttactatgactatgcattaggcagtgcgagctatcaaacgttagatggagac
gtctctggagaaatatcgttgaagcgacaatttattattcgtaatggagtaataaaagca
atgtttgatacaggacttacaattggtgatcaattgctacaagaagctctaggtaataat
gcaagtacgacgatgaaaagtattgtcgcaacgattcaaaaagagcagaataaaatcatt
cgtaacgaaaagagcaaattattagtagtgcaaggggtagcgggtagtgggaaaacttct
gccgcattacaaaggatcgcttatttgatgtatcgttatcggaagcaattaaatccggaa
aatgtcatgctattttcgccaaatcctttattttcaagctatatccgtaatgtgttacct
gaacttggtgaggagaatgtaagacaaactactttttactactttgtggaagaaaaaaca
ggagaagaattttcaattgaatccccttttacacaaatggagtatatgctgacaaataaa
ggaacaacagatggtcaaattcgtatgcaagggattgcctataaatcttcgctcgcattt
aaggaagtgatcgataattatgttgcttgtttatatatttccggggtttgttttaaacct
gttgtgtttcgcaaccaagttattatttcgaacgaggcaatcgctaattatttttactcg
ttggattcttccgtttctttattcaatcggatggaactagtcgcaaactggctgttgaag
gaactagctttgattcaaaagcgggaagtttcgaaggattgggtagaagaaaaaatagaa
ttgttggataaagaagcctatgcgaaggcgtattataaggcacaaaagcaagctgctgga
agcgtagtggacgaagagatgattttaagaaaagccgttgtgagtaaaatgtttgctcgt
atcaagaagcgaataaaacagtatgcgtttgtcgatgttccaaaaacatttgcacaattg
tttaagcatcaggaacaacaaaaggatctgccaacggaatggaatgatattgctgcacaa
acgataaaaaatattcagtccaatatcttggggtgggaagacgcagcgccatatgcgtac
tttaaaggcaaactgcttggagatatggcggatcgttccgtgcgctatttagtaatagat
gaggcacaggatttttccgcttttcaatttgcctatattaaggagttgtttccacatacg
agaatgacgctattaggggatgtgaatcaagctatttataatcccatatctaaacaaaat
ccattacttttagatgaaaaaaatgatgtggagcgaattacattaacgaaaagctatcgt
cctacgaaacagcttgtccaatttacaaggcatttcgcccctggtaaagatgttattgag
ccgtttgaacgagaaggaaacaaaccaaagcttgttgatgtaaaagaagaaaatcagctt
gtagaagtgctaattaatgaggtacaagaactgtttcaaaaaggatatgaaacgatagcg
ctcgttacgaaatcgatacaggaaagtaaacaattatataagacattaaaaggaaagata
gattgtatattagttgatgaagagacatacacgtttacaaaagggattttaatcattccg
gtgtatttagcaaaaggcattgaatttgatgcggtagttattccagatgcaacaaacaag
cattatacaaaggaagatcaaatcttattttatacagcttgtacgcgagcaatgcatgaa
ttatcgataatggttacaggtgagccaaccgcctttataaaggaaacgcctaaaaacacg
tatcaaatgaccgagatttag
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