Virgibacillus sp. 6R: BKP57_18870
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Entry
BKP57_18870 CDS
T04596
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_18870
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKP57_18870
Archaeal homologous recombinant proteins
BKP57_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
GTP_EFTU
AAA_16
Motif
Other DBs
NCBI-ProteinID:
API93690
LinkDB
All DBs
Position
4259921..4263013
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPIKLTMTAFGPYKDKEVIHFDDLGDNRLFVIAGNTGAGKTTIFDAICFALYGAASGQD
RESNAMLRSDFAEDHVHTAVELLFDLKCKQYRILRQLGHVKKGNKTKTGERYEFFEMTSD
GEIPCVDRQIVSEINCKMEQLIGLTQDQFKQIVMLPQGEFRKLLTSQTENKEEILRRLFK
TETYQAITERLKQKKLATEEAFRQADQELKQYIAQIHATLPIREEGALFQTLEQENYNMN
QVLQGLQEECRYYEGKIITDKKIYEHAYHMHDKKQKEFYQATTINERFAELNQKQARLKE
LELQETAHSQKKGKLEQAERAQGIILLEQQRNDWLQEEENKKRHLTEAKRNKQLIDEQVN
QANINFEAEEKREPKREALRKQLDKLKEYLPIVEQIDKMNRSLIDLEKQTNQASEALYST
EQSLTKKNAQMEQVDKQINQLDQLVAKLPDLQEELITMREQYRLVRDYRKLMEQQILLKN
EAKQKQKTAIQMKGNYNKLEQAWMDNQAVYLAAHLHDGEACPVCGSVDHPNKATQQREAV
TKEQLEKARREFERLDGEYRDVLGKLKANQDDVRAKTTELEMHHIVITSAKQKEDQLAAA
GKQLSAEVEQLKQQRNQLGERKRELEKLRSSCKELEAKYKEQQQRDHQLKLKLAQEETLY
QERIQFVPENMRILSELKEQLSKTQSNLKKLEQAWEEVQKQQQKSKEEQMKASSEVTHAK
KQLEEAIQKRDKAVTQFIQALEKEHFYSEESYQKAKMPESERLALKEELEQYDQTKSMLR
EQVQELKNVLTDKHQFDLTVIQTELNHWKEEYEAALDRLNKSKHYGQEAQALKQYIQQGI
EKTTERERRLQRIADLYDTVRGQNNRKVSFERYLQIEYLEQIIAAGNERLKELSNGQYVF
IRSDRQESHGKQSGLALDVYDAYTGQTRDVKTLSGGEKFNASLSLALGMSDVIQSFQGAI
SIDTMFIDEGFGTLDEEALNKAIDTLVDLQRSGRMIGIISHVQELKTIFPAVLEVSKSKD
GSSRTKFIIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgataaagttaaccatgacggcgtttggtccatataaggataaagaagtaatc
cattttgatgatcttggagataatcgtctattcgtaatagcagggaatactggagcaggc
aagacaacgatttttgatgccatttgttttgctctatatggtgctgccagtggacaagac
agagagagcaatgcaatgcttcgaagtgattttgcagaagaccacgttcatacagctgta
gagctcttgtttgatttaaaatgcaaacagtatcggattttgcgacagctggggcatgta
aaaaaaggcaataaaacgaaaacaggcgagcgatatgaattttttgaaatgacaagtgac
ggtgaaataccttgtgtagataggcaaattgtatcggagattaattgtaaaatggaacag
cttatcggtttaacacaggatcaatttaaacaaattgtgatgctgccacaaggcgaattt
cgtaaattgttaacatcacaaacagaaaataaagaagaaattttacggcgattatttaaa
acggaaacgtaccaagcaattacggagcgactgaagcaaaaaaaattggcgacagaagaa
gctttcaggcaagcagaccaggaactaaagcaatatattgctcaaatccatgctacgctt
ccaattcgggaagaaggggcactttttcaaacattagagcaagaaaattataatatgaat
caagtattacaaggtcttcaggaagaatgtcgttattatgaaggaaaaatcatcacagat
aaaaaaatatatgaacatgcgtatcatatgcacgataaaaaacaaaaagaattttatcaa
gcaacaacgattaatgagcgttttgctgagttaaatcagaaacaagcacgtttaaaagag
cttgaactacaggaaacagcacatagccaaaaaaagggtaaactagagcaagcggaacgc
gcccaagggattattctattggaacagcaaagaaatgattggcttcaagaagaagaaaac
aagaaacgacatctaactgaagcaaaaagaaataaacagctgatcgatgaacaggtgaac
caggcgaatataaattttgaagcagaggaaaagcgtgaacctaaacgtgaagcccttcgt
aaacaactggataaactaaaggaatatttgccaattgtagaacagatagataaaatgaac
cgaagcttaattgatttggaaaaacaaaccaaccaggcttctgaagcactatattctact
gaacagagtcttacgaaaaaaaatgcccagatggagcaagtggataagcaaataaaccag
cttgaccaattggtagcaaagctacctgatctgcaggaagaattaattacgatgcgtgaa
caatataggctggtgcgtgattatcgtaaactaatggaacagcaaatattgttaaaaaac
gaggcaaagcaaaaacaaaaaacagctatacagatgaaaggaaattataacaaactggaa
caagcatggatggataatcaagcagtttatctagctgcgcatttacatgatggagaggct
tgtcctgtttgtggcagtgtagaccatccaaataaagccacacagcagagggaagctgtt
acaaaagagcaattagaaaaagctagaagagaattcgaaaggctagatggggagtatcgt
gatgtacttggtaaattaaaagcgaatcaagatgatgttcgtgcaaaaacgactgaatta
gaaatgcaccatattgtcataactagtgcaaaacaaaaagaagatcagcttgccgctgct
ggtaaacagcttagtgctgaggtagagcaattaaagcaacaacgtaaccagctgggagaa
agaaagcgcgaattggaaaagctacgctctagctgtaaagaattagaagcaaagtacaaa
gaacagcaacaaagagatcatcagctaaaattaaaattagctcaagaagaaacgctctat
caggaaagaattcaatttgttcctgaaaatatgcgtatattatccgaattaaaggaacaa
ttatctaaaactcaaagcaatctaaaaaagttagaacaagcatgggaagaagtgcaaaag
cagcagcaaaaatccaaagaagagcaaatgaaagctagttcagaggtcactcatgcaaaa
aagcagctagaagaagcgatacaaaaacgtgacaaggcagtgactcagtttatccaggcg
ttggaaaaggaacatttttattcagaagagagttatcaaaaagcaaaaatgcctgaatct
gaacggttagctttaaaagaagagctcgaacaatatgaccaaactaaatctatgttacgt
gaacaggtccaggaattaaagaatgtgttaacagataaacatcaattcgatttaactgtc
attcaaaccgaattaaatcattggaaagaagaatatgaagcggctttagataggttgaat
aagtccaagcattatgggcaggaagcacaagcattaaagcaatatattcaacaagggatt
gaaaaaacaacggagcgtgaacgtaggctgcaacggatagctgatttatacgataccgta
cgcgggcaaaataatcggaaagtatcgtttgaacgctacttgcagatcgaatacttagaa
caaattattgctgcgggaaatgaacgattaaaagaactgtccaatggtcaatatgtcttt
atacgtagtgatcgtcaggagtcacacggcaaacagagtggtcttgcccttgatgtatac
gatgcctatacaggacaaacaagggatgtgaaaactttatcggggggagagaagtttaat
gcctcccttagtttagcgcttggaatgtcagatgttattcaaagctttcaaggtgcaatt
tcaattgacacgatgtttattgatgaaggttttggtacgttggatgaggaagcattaaat
aaagcaattgatacgttagtcgatctgcaacgatctggtagaatgatcgggatcatttct
catgttcaggaattaaagactatttttccagctgtcctggaagtgtccaagtccaaagat
ggatcgagcagaacgaaatttatcattaaataa
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