Virgibacillus sp. 6R: BKP57_19855
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Entry
BKP57_19855 CDS
T04596
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vig03032
]
BKP57_19855
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_19855
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BKP57_19855
DNA replication proteins [BR:
vig03032
]
Prokaryotic type
DNA Topoisomerases
BKP57_19855
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BKP57_19855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
Toprim_2
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
API93876
LinkDB
All DBs
Position
4487076..4489154
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDAENDYAPKYITIRGK
GDVVKDLKAAAKKAKKIYLAADPDREGEAIAWHLAHILNIDEQSECRVVFNEITKEAIKE
SFKHPRSINMNLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKLIIDREK
EIENFKPEEYWSIDAQFLKDKELFQGSFYGVNGKKVALKTEADVKEIKQMLQGDQFTVDK
VNKKERRRNPAQPFTTSSLQQEAARKLNFKAKKTMMVAQQLYEGIDLGRQSGGITGLITY
MRTDSTRISETAKNETKSYISEQYGREYLGPNKQAKQSESAQDAHEAIRPTSVLREPNTL
KSILSRDQLRLYKLIWERFLASQMAAAVMDTMTVHLLNNNVEFRATGSKIKFKGFMKVYV
EGNDDNKKDENKLLPALTEGMKVKAQEIKPNQHFTQPPPRYTEARLVKTMEELGIGRPST
YAPTLDTIQRRGYVSVDNKRFVPTELGTIVLELVEEFFPKIIDVDFTAQMENDLDAVEEG
RTEWVKIIDQFYQEFEKRLKKAEQEMEKVEIKDEPAGIECENCGHEMVYKMGRYGKFLAC
SNFPECRNTKPILKKIGVNCPKCKNGEIVERKSKKRRTFYGCDQFPECDFVSWDKPISRP
CPKCNALLVEKKAKKGTQIQCTNCEYKEEVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatctagtaatcgtcgaatcgcctgcgaaggcaaagacgattgaacgttat
ttaggcaaaaaatataaagtaaaggcttcaatgggtcatgtgagagatttaccaaaaagt
caaatgggtgttgatgcagaaaatgattatgcaccaaagtacatcacgattcgcggaaaa
ggggatgtcgttaaggacttaaaggctgctgcaaaaaaagcaaagaaaatttaccttgcc
gctgacccggatcgagaaggggaagctatcgcttggcatctagcgcatattttaaatatt
gatgaacaatcagaatgcagggttgtattcaatgagattacgaaagaagcgattaaagag
tcgtttaagcaccctagatcgataaatatgaacttagtggatgcacaacaagcaagaaga
atattggatcgtcttgtcggatacaatattagtccattattatggaagaaggttaaaaag
ggtttaagtgcaggtcgtgtacaatctgttgctgtcaaattaattatcgaccgtgaaaaa
gaaatagaaaactttaagcctgaagagtactggtcaatagatgcacagtttttaaaggat
aaagaactatttcaaggttcgttttatggggtgaatggaaaaaaagtagctttaaaaacg
gaagcagatgtaaaagaaattaaacaaatgcttcaaggtgaccagttcacggttgataaa
gtgaataaaaaagagcggaggcgaaatccagctcaacctttcaccacttcttccttacaa
caggaagccgctagaaaactgaatttcaaagcaaagaaaactatgatggttgctcagcaa
ttatatgaaggaatcgatcttggacgtcaatcgggtggaataactggtttaattacgtat
atgcgtacagactcaacaagaatctctgaaacagctaaaaatgaaaccaaatcgtatata
agcgaacaatatgggagagagtaccttggaccaaataagcaagcaaaacaatcagagtct
gctcaagatgcgcatgaggctattcgaccaacatctgtgttaagagagccaaatacactc
aaatcgattctttcgagagatcagctccggttatacaaattaatttgggaacgtttttta
gccagtcagatggctgctgctgtaatggacaccatgacagtccatttattaaataataat
gtagagtttcgagctacgggatcgaaaattaagtttaaaggttttatgaaagtgtacgtt
gaaggaaatgatgataataaaaaagatgaaaataaactgcttccagcattgacagaaggc
atgaaagtgaaagcacaggaaataaagccaaaccaacactttacacagccacctccaaga
tacacggaagcgagattagtaaaaacgatggaagagcttgggattggccgcccatctact
tatgcaccaacgttggatactattcaaaggagaggctatgtaagtgttgataataagcgg
tttgtcccaacggaattagggactattgtattggaactagttgaggaatttttcccgaag
attattgatgtggatttcactgctcaaatggaaaatgatttagatgctgttgaagaaggg
cgtacagaatgggtgaaaatcattgaccaattctatcaagaatttgaaaaacgcttgaaa
aaagcagagcaggaaatggaaaaagtggaaataaaagatgaaccagcaggaattgaatgt
gaaaactgtggtcacgaaatggtttataaaatgggaagatacgggaagtttttagcttgc
tctaactttccagagtgtagaaacacgaagccgatcttaaagaagataggtgtgaattgt
cctaaatgtaagaatggggaaattgtagaaagaaaatcaaaaaagcgtcgcacattttat
ggttgcgatcagtttcctgaatgtgactttgtttcatgggataaacccatttcacgccct
tgccctaaatgtaatgcgttattggtggagaagaaagcgaaaaagggaacgcaaattcaa
tgtacaaattgcgaatataaagaagaagtacagaagtaa
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