Virgibacillus sp. 6R: BKP57_20125
Help
Entry
BKP57_20125 CDS
T04596
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vig03016
]
BKP57_20125
Enzymes [BR:
vig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BKP57_20125
Transfer RNA biogenesis [BR:
vig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BKP57_20125
Prokaryotic type
BKP57_20125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
YyzF
Motif
Other DBs
NCBI-ProteinID:
API93929
LinkDB
All DBs
Position
4541897..4542790
Genome browser
AA seq
297 aa
AA seq
DB search
MDGILPLWKPKGLTSHDCVIKIRKMFQTKKVGHTGTLDPDVEGVLPICIGKATKIVPFLT
DTKKTYSAKLKLGVATDTEDASGNPIEEKSVEVMPEQQHIEDVMRQFIGEINQIPPMYSA
VKVKGKRLYEYARENQYVERPVRRVRIDEIQLLSTPNEQEHSIAFRVVCSKGTYIRTLCV
DIGKALGYPAHMLTLVREATGAFSNKNAVTFATIEEVIFKKQEATLLYPIQMGLTHLDVW
NVDSETAKKVLYGQKLPNNIQLRTDPFVIMHQNRVLAIYQSHEKQAGYIKPVRVFSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatattgccattatggaaaccaaaaggccttacttctcatgattgtgtgatt
aaaatccgcaaaatgtttcaaacaaaaaaagtaggacatacaggtacattagatccagat
gtggagggggttttacctatctgcattggaaaagcaacaaaaattgttccttttttaacc
gatacaaaaaagacatatagcgctaagctaaaattgggagtcgcgacagatacggaggat
gcgtctggtaatccgattgaggaaaaatcggtagaagtgatgccggaacaacagcatatt
gaagatgtaatgcggcaatttataggggaaattaatcaaatccctcccatgtactcagca
gttaaagtaaaagggaaaaggctatatgagtatgctagagaaaatcagtacgtggagcga
ccagtcaggcgagttaggattgatgaaatacagctactttcgactccgaatgaacaggaa
cattcgatcgcatttcgggttgtttgttcaaaaggaacctatattcgtaccttatgtgta
gacatcggaaaagctctaggataccctgcgcatatgttgacattagtaagagaggcaaca
ggagcattttccaacaaaaatgcggttacatttgctacaatagaagaggtcatttttaaa
aaacaagaagctacgttattatatccaattcaaatgggtttaacccatctggatgtatgg
aatgtcgattccgagacagctaaaaaggtgttatatgggcaaaaactacctaataatatc
caattgaggacagatccatttgttatcatgcatcagaatcgtgttctagccatttatcaa
tctcatgaaaagcaagcaggctatataaagccagtccgtgtatttagtagataa
DBGET
integrated database retrieval system
