Virgibacillus sp. 6R: BKP57_20265
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Entry
BKP57_20265 CDS
T04596
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
vig
Virgibacillus sp. 6R
Pathway
vig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKP57_20265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_20265
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKP57_20265
RecFOR pathway proteins
BKP57_20265
TLS (translesion DNA synthesis) factors
Other SOS response factors
BKP57_20265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
ATPase_2
AAA_24
AAA_16
AAA_25
CobU
AAA_22
ABC_tran
AAA
AAA_35
AAA_14
CbiA
DEAD
PT-HINT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
API93956
LinkDB
All DBs
Position
4574864..4575904
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AA seq
346 aa
AA seq
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MSDKKQALDMALKQIEKQFGKGSIMKLGEQAEQKIATIPSGSLALDVALGIGGYPKGRVV
EIYGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVDIEELLLSQPDTG
EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAI
NKSKTTAIFINQIREKVGVMFGNPEITPGGRALKFYSSVRLEVRRAESLKQGNDMVGNKA
RIKVVKNKVAPPFKQAEVDIMYGEGISKEGEILDIGSDLDIVQKSGAWYSYNEERLGQGR
ENAKQFLKENTDMMAEIHAAIRQHYNLDDEPNEEEAEAFSQESLDV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgataaaaaacaagctttagatatggcgttaaaacaaatagagaagcagtttgga
aaaggttccatcatgaaactgggagaacaagctgaacaaaaaatagcaactatacctagt
ggttcactagcattagatgtagcacttggaatcggtggatatccaaaaggtcgagttgtt
gaaatatatggtccggaatcgtccggtaaaacaacggtagctttacatgcaattgcagaa
gcacagcaacagggtggacaagcggcctttattgatgcggagcatgcgcttgacccaaca
tatgcacgcgctttaggagtggacattgaagaactattactctcacagcctgatacaggc
gaacaggcacttgaaatcgcagaagctcttgtccgcagcggagcagttgacattattgta
gtggattctgttgcagcacttgttccaaaagcagaaattgagggcgagatgggcgattcc
catgtggggcttcaggctcgtctaatgtcccaagcattgcgtaaattatccggagctatt
aataagtcaaagacaaccgcaatctttattaaccaaatccgtgaaaaagtcggtgttatg
tttggtaacccggaaattactcccggcggtcgtgcactgaaattctactcatctgtgcgg
cttgaagtgcgtcgtgctgaatcattaaaacaagggaatgatatggtcgggaacaaagcg
agaattaaagtcgttaaaaataaggttgctccaccatttaagcaagcagaagtagatatt
atgtacggggaaggcatatccaaagaaggcgaaattttggatattggctctgatttagat
atcgtgcaaaaaagcggtgcctggtattcatataatgaagaaaggcttggtcaaggacgt
gaaaacgcgaagcaatttttaaaagagaataccgatatgatggctgaaattcatgcggca
atcagacagcattataatttagatgacgagccgaatgaagaagaagccgaagcattcagt
caggaaagtctggacgtataa
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