Virgibacillus sp. 6R: BKP57_20880
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Entry
BKP57_20880 CDS
T04596
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
vig
Virgibacillus sp. 6R
Pathway
vig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKP57_20880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vig03000
]
BKP57_20880
Transcription factors [BR:
vig03000
]
Prokaryotic type
Helix-turn-helix
Other families
BKP57_20880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
TPR_8
TPR_2
TPR_MalT
HTH_19
TPR_7
HTH_31
Yippee-Mis18
TPR_17
DHR-2_Lobe_A
DUF8042
Motif
Other DBs
NCBI-ProteinID:
API94385
LinkDB
All DBs
Position
4704033..4705313
Genome browser
AA seq
426 aa
AA seq
DB search
MVDIGSIIKLQRTKRNMTQGELSEGIVSLSYLSKIENKKTKASPEIIQLLCNRLEIELTD
TPDVQIEEKCKQWYAMLFDHLDKQAMVTKYEELQELMDRSINDQTLMFEIHKIRYYCVLR
DLGKALQKINELHEMADSFNPTHKYYWYKFKGTYNSHKEDHQQAMQYYKLAEETTNLANI
TDDEIADLRYAISVTHSHLWEDLEAIEYARQAMEIFQRDYNFARCAQCHILLGIAYQKID
KSDIAIKNYNLALHLGELHNNEDVIHLAHYNLGYLHSLMGNSEEAIKHYLVAIQNNNLTE
KIKLESLTRLIQELYTIGEYEKAGKYLRQTSEILESVKESFEYYNYNKLYDKIIEIYTHL
LNGETKRFQSVLTDELIPYLKQRKDYYHLLFYAKMLATHLEKMGKYKASLQYYKLADSSY
QQIIKL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttggtagatataggttctattatcaaattacagcgaacaaagcgtaatatgacacaaggg
gaattgtcagaaggcattgtttcattatcctacttatcaaaaatagaaaacaagaagaca
aaagcaagcccagagattattcaattactctgtaaccgattagaaatcgaactcacggat
acgccagatgtacaaatcgaagaaaaatgtaaacaatggtacgcaatgctatttgatcat
ttggacaaacaagcaatggtaacaaagtatgaagagttgcaagaactgatggatcgaagt
attaatgatcaaaccctcatgttcgagatccataaaattcgttactactgtgttttacgt
gacctaggaaaagccctacaaaaaattaatgagcttcatgagatggcagattcatttaac
cctacacataaatattactggtataaatttaagggaacctacaattcacataaagaagac
catcaacaagccatgcagtattataaattggcggaggaaactactaatctagcaaatatt
accgacgatgaaattgctgatttacgttacgcgatctccgtgactcacagtcatttgtgg
gaggatctagaggcaatagagtatgcaagacaggccatggaaatatttcaacgagattac
aattttgctcgttgcgcacaatgtcatattctattaggaatcgcgtatcaaaaaattgat
aagtcagatatagcgattaaaaactacaatttagctttacatttaggtgaattacacaat
aatgaggatgtgatccatctagcacattataatctcggctacctgcattcattgatggga
aactctgaagaagcaattaaacattatttggtagccatacaaaataataacttaactgaa
aaaataaaattagaatcgcttactcgtctaatacaagaactctatacaattggagaatat
gaaaaagcaggtaaatacttacgccaaacttctgaaatattagaatcggttaaagagagt
tttgagtattataattataataaattatatgacaaaattatcgaaatatatacacatttg
ttaaatggagaaacaaagaggtttcaatcagtattaacagatgaattaataccttactta
aaacaaagaaaagattactatcatttattgttttatgcaaaaatgctagctacccaccta
gagaaaatgggtaaatataaagcatctttgcaatattataaattagctgatagtagttat
cagcaaataattaaattgtag
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