Vibrio sp. HB236076: AB0763_00415
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Entry
AB0763_00415 CDS
T10847
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03030
DNA replication
vih03410
Base excision repair
vih03420
Nucleotide excision repair
vih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB0763_00415 (polA)
03410 Base excision repair
AB0763_00415 (polA)
03420 Nucleotide excision repair
AB0763_00415 (polA)
03440 Homologous recombination
AB0763_00415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vih03032
]
AB0763_00415 (polA)
03400 DNA repair and recombination proteins [BR:
vih03400
]
AB0763_00415 (polA)
Enzymes [BR:
vih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB0763_00415 (polA)
DNA replication proteins [BR:
vih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB0763_00415 (polA)
DNA repair and recombination proteins [BR:
vih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB0763_00415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB0763_00415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
HHH
HHH_5
PTHB1_hp
Motif
Other DBs
NCBI-ProteinID:
XDK25152
UniProt:
A0AB39HB28
LinkDB
All DBs
Position
1:91096..93879
Genome browser
AA seq
927 aa
AA seq
DB search
MATIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVINMLRSMMRQFSSERIAV
VFDAKGKTFRDDMFADYKANRPPMPDDLRCQIEPLHQVIHAMGLPLICEPGVEADDVIGT
LAAQASAKGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDRQGVEEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGIGGLDSLYQRLDDIAELGFRGSKSMAKKLVDNK
EAAYLSYQLATIKLDVELAETPESLHKKEPNIDELVKLYGQLSFKSWLNELLDGGSPVIE
TRAQQAEAQQAAAEESQTVAANINASEYQMVLTESDFVAWLEKLEQCERFAFDTETDSLN
YMQANLVGVSFAIEAGKAVYVPVAHDYLDAPEQLDRDWVVEKLKPILENPAIGKIGQHIK
YDANVLARYDVHLQGICDDTMLASYVYNSVGGKHDMDSLALRFLQHACVSFEQIAGKGKN
QRTFNQIELEQAAVYAAEDADVTLQLQQNINALLEKNSELTAIYRDIEVPLISVLARMEQ
TGVYIDDMLLSAQSQEIATRLDELEKQAFEMAGQEFNLSSPKQLQTILFEKMALPVIKKT
PSGTPSTNEEVLQELALDYPLPKLLLEYRGLAKLKSTYTDKLPKMIDPTTGRVHTSYHQA
VTATGRLSSTEPNLQNIPIRNAAGRRIRQAFVAEHGHKILAVDYSQIELRIMAHLSGDDA
LLSAFQQGKDIHAATAAEIFAVSIDEVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRA
EAQQYMDTYFERYPGVLQYMEDTRATAAEKGYVETIFGRRLHLPEIRSRNGMRRKAAERA
AINAPMQGTAADIIKKAMLLVDAWIEQEGQGKVKLLMQVHDELVLEVKESDLASVSEKIQ
ALMASAADLSVPLIAEAGHGDNWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccacgattccagataatccattgatattgattgatggctcatcctatttgtaccga
gcattccacgcttatccaggtacgatgagcaatggcgagatcccgaccaatgcggtctat
ggggtaattaatatgctgcgcagtatgatgaggcagttctcatcggagcgcattgctgtc
gtttttgacgccaagggcaaaacctttcgcgacgatatgtttgcagattacaaagccaat
cgtcccccaatgcccgacgatttgcgttgtcaaattgagccattacatcaagtgattcat
gcgatgggcttgccattgatttgtgaacccggtgttgaagccgacgatgtgattggcaca
ctcgctgctcaggcatcagctaagggcatgcctgttttgatcagcacgggtgataaggac
atggcgcaattagtcgacgataacatcacgctgatcaacaccatgaccaatgtcgtgatg
gatcgtcaaggcgtggaagaaaagtttggtattccacctgaactcatcatcgactacctc
gccttgatgggcgataaagtggataacattcccggtgtccctggtgtgggggaaaaaacc
gcgaccgctttgctccaggggatcggtggcctagacagtctttaccagcggttagacgac
attgccgagcttggctttcggggttcaaagtcgatggcgaaaaaattggtcgacaacaaa
gaggcggcgtatttatcgtatcaattagcgacgataaaactggacgttgagctagccgaa
accccagagagtctacacaaaaaagagcccaatattgatgagttggtgaaattgtatggg
cagttgtcgtttaagtcttggttaaacgaattactcgatggcggttcgccggttatcgaa
acgcgtgcccagcaagctgaagcacaacaagcggcggcagaagaaagtcaaacggttgcg
gccaatattaatgccagtgaataccaaatggtgttgacggagtctgactttgtggcctgg
ttggaaaagctcgagcaatgtgaacgttttgcttttgataccgaaaccgatagcttgaac
tacatgcaagcaaacttggttggggtttcctttgcgattgaagccggtaaagccgtctat
gttccggtggcgcacgattacctcgatgcaccagaacaattggatcgcgattgggtggtt
gagaaactcaagcccattttagaaaaccccgccattggtaagattggccagcatattaaa
tacgatgccaatgtattggcgcgctatgatgttcatttacaaggcatctgtgacgatacc
atgctggcttcttatgtttataacagtgttggcggtaaacacgatatggacagcttggcg
ctgcgtttcttacaacacgcctgcgtttcctttgagcaaattgcgggcaaaggtaagaat
caacgcacctttaatcaaattgagctcgagcaagccgcggtttacgcagcagaagatgcg
gatgtgactttgcaattacagcaaaatatcaatgcgctacttgaaaaaaacagcgagttg
accgcgatctatcgcgatattgaagtgccgttgatttcggtgttggcccgtatggagcaa
accggggtctacattgatgacatgttactaagtgctcagtcgcaagagattgccactcgt
cttgatgagttagaaaagcaggcctttgagatggcagggcaagagtttaacctgagctcg
ccaaagcaattgcaaaccattttatttgaaaaaatggccctgccggtgatcaagaaaacg
ccgtctggaacgccttcgaccaacgaagaagtattgcaagagttggcactggattacccc
ttgcctaaattattactcgagtatcgcggtctggctaaactcaagtcgacatacacggat
aagttaccgaagatgattgacccaacaaccggtcgtgttcatacctcttatcaccaagcc
gttaccgcgacagggcgcttgtcatcgacagagcctaacttacaaaatattccgattcgc
aacgccgccggtcgccgcattcgccaagcgtttgttgccgaacatggccataaaatttta
gcggtcgattactcacaaattgaattgcgtattatggcgcacttatctggcgatgacgcc
ttgctaagtgccttccagcaaggcaaagacattcatgcggcaacagcggcagagatcttc
gcggtgagtatcgatgaggtgagctcggagcaaagacgccgtgcaaaagcggttaatttc
ggccttatctatggtatgagtgcctttggtcttgcgaaacagttggggattcctcgagca
gaagcgcagcagtatatggatacctattttgagcgttatcccggtgttttacagtacatg
gaagacactcgtgcaacggcggcagagaaggggtacgtggaaaccatttttggtcgtcgc
ttacatttaccagaaattcgttcgcgcaatggcatgcgtcgtaaagcggcagagcgcgcg
gcgatcaatgcgccaatgcaaggcacagcggccgatatcatcaagaaagcgatgttgctt
gtcgatgcgtggattgaacaagaaggtcaaggcaaggttaagctactcatgcaagtacac
gatgaattggtgcttgaggtgaaagaatctgatctggcaagcgtcagtgagaaaatccaa
gctttgatggcctcagcggcggacttatctgtaccgctgatcgcagaagccggtcacggc
gacaactgggatgaagcgcactaa
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