Vibrio sp. HB236076: AB0763_00510
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Entry
AB0763_00510 CDS
T10847
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
vih Vibrio sp. HB236076
Pathway
vih03070
Bacterial secretion system
vih05111
Biofilm formation - Vibrio cholerae
Brite
Secretion system [BR:
vih02044
]
Type II secretion system
General secretion pathway protein
AB0763_00510 (gspD)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDK25170
UniProt:
A0AB39HGE5
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Position
1:117240..119273
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AA seq
677 aa
AA seq
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MKHWLRKSTWLMLGSLLTAPSLVWAEEFSASFKGTDIKEFINVVGRNLDKTIIVDPSVRG
KIDVRSYDLLTEEQYYSFFLNVLEVYGYAVVESDNNVLKVIKAKDSKTAAIPVVGDDSAQ
GDNVVTRVVAVKNVSVRELSPLLRQLVNNAGAGNVVHYDPANIILLTGRAAVVNRLANII
KRVDQAGDKNVEVIELQNASASEMVRIVEALNKEGKSSNTPELLIPKIVADERTNSVLIS
GEPQVRERITNLIRKLDIEMATKDNNNRVVYLKYAKAEELVNVLQGVSDNLLKNKSSGDK
KSSSSSSQRENVVISAHPETNSLVLSAPPDVMAAMQGIIDQLDIRRAQVLIEALIVDMSE
NNGVNLGVQWGSLSSGSVIQYGNASTQIGSVMVGIEEAKDSTETISGVSDGEVYSYESTD
DGDYTTLASSLSSVEGAAVAITFGDWTALLTAVESDSNTNILSSPSITVMDNGEASFIAG
EEVPVITGSTTGSGGDSSPFQTVERKEVGIKMTVVPQINEGDAVQLTIEQEVSNVLGASG
AVDIRFGKRQLKTSVMVNDGQMIVLGGLIDERTAESESKVPLLGDLPYIGWMFRSTSSAV
EKRNLMVFLKPTIIRDGMTADGLTQRKYNYIRAEQLYQAEKDLRLMDGVHTPVMPKYGLD
QYHAPEIQAFIGQVREQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacactggttacgcaaaagcacttggttgatgctcggcagcttactcactgcgcca
agtttggtttgggcagaagaattcagtgccagctttaaaggcaccgacatcaaagaattt
atcaatgtcgtcggacgcaacttggacaaaaccatcatcgtcgatccctctgtgcgtgga
aaaatcgatgtgcgcagttatgatttactcactgaagaacagtattatagctttttcctc
aatgtgttagaggtttatggttacgctgtggttgaatcagacaacaatgtcttaaaagtg
atcaaagcgaaagattctaaaaccgccgcgattccggtcgtcggtgatgactctgcgcaa
ggcgacaatgtcgtgactcgtgtggtggcagtaaagaacgtgtcggtccgtgagctttcc
cctttgttgcgtcagttggtgaacaacgctggggcagggaacgtggtgcattacgatccg
gccaatatcattttgctgactggccgtgctgcggtggtcaatcgcttggccaatatcatt
aaacgggtcgatcaagcaggcgacaaaaacgtggaagtgatcgaacttcaaaatgcgtct
gcttcagaaatggtgcgcattgtggaagccctgaataaagaagggaaaagcagtaatacc
ccagagttgttgatcccgaaaattgtcgccgatgagcgcacgaactcggtattgatctcc
ggtgaaccgcaagttcgcgagcgaattaccaacttaatccgcaagctcgatattgaaatg
gcgaccaaagacaacaacaaccgggttgtctatctcaagtacgccaaagcggaagaattg
gttaacgtgttgcaaggcgtgtcggacaacttactgaaaaacaaatcctctggcgataag
aagtcctcttcgtcgagcagtcaacgtgaaaatgtggtgatttctgctcatccagaaacc
aactcattggtcttgtcggcgccgccggatgtgatggcggcgatgcagggcatcatcgat
caattggatattcgccgtgctcaagtgttaattgaggctttaattgtcgatatgtcggaa
aacaatggtgtcaacctcggtgtgcaatggggttcactgtcgagtggtagcgtgattcag
tacggcaacgccagtacgcaaattggcagtgtgatggtcggtatcgaagaggccaaagac
tcaacggaaaccattagcggtgtgtcagatggtgaagtgtactcttatgagtctaccgac
gacggtgattacaccaccttggcgtcctcgttgtcgagtgtcgaaggagccgccgtggcg
attacctttggtgactggacggcattgttgaccgcggtcgaaagcgattcaaacaccaat
attttatcgtcgccgagtattacggtgatggacaatggtgaggcgtcgttcatcgctggt
gaagaagtgccggtgatcacggggtcaacgacggggagtggcggtgacagcagcccgttc
caaaccgttgaacgaaaagaagtgggcattaaaatgaccgtcgtgccgcaaattaacgaa
ggcgatgcggtgcaattgacgattgagcaagaagtgtcgaacgtacttggcgccagtggc
gctgtggatattcgctttggcaaacgtcagttaaaaacctcggtgatggtcaatgatggt
cagatgatcgtcttaggtggcttgattgatgagcgcaccgcagaaagtgagtcaaaagtg
cctttgcttggcgatttgccttacatcggttggatgttccgctcgaccagcagtgcggtt
gaaaagcgcaatctgatggtgttcttaaagcccaccattattcgcgatgggatgacggcc
gacggtttaacccagcgcaaatacaattacatccgcgccgaacagctttatcaggcggaa
aaagatctgcgcttgatggatggggtacacacccccgtgatgcctaaatacggtcttgat
caatatcacgcccccgaaattcaagcttttattggtcaggttagggagcagtaa
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