Vibrio sp. HB236076: AB0763_00950
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Entry
AB0763_00950 CDS
T10847
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vih Vibrio sp. HB236076
Pathway
vih03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AB0763_00950 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vih03019
]
AB0763_00950 (orn)
03009 Ribosome biogenesis [BR:
vih03009
]
AB0763_00950 (orn)
Messenger RNA biogenesis [BR:
vih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB0763_00950 (orn)
Ribosome biogenesis [BR:
vih03009
]
Eukaryotic type
Pre-60S particles
RNases
AB0763_00950 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XDK25254
UniProt:
A0AB39HGC1
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All DBs
Position
1:211285..211830
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AA seq
181 aa
AA seq
DB search
MSSSEQNLIWIDLEMTGLDPKTHKIIEIATIVTDAELNVLAEGPVIAITQPEHELAKMDD
WCTRTHTESGLVERVRQSDIDEAEAAAQTIAFLEQWVPKGKSPICGNSIGQDRRFLVEGM
PELEAYFHYRYLDVSTIKELTRRWSPDLLEGLNKKGSHLALDDIRDSIAELKYYRQHVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccagtgaacaaaatttgatttggatagatcttgaaatgacaggattggatcct
aaaacccataaaattattgaaattgctaccatagtgaccgatgctgagctcaatgtgttg
gctgaaggcccagtgatcgccattacacagcctgagcatgaattggcgaaaatggacgac
tggtgtactcgtacacacacagaaagtggcttagttgagcgcgtgcgtcaaagcgatatt
gatgaagctgaggcggccgcacaaacaatcgcctttcttgagcaatgggtacccaaaggc
aagtcaccgatttgcgggaatagtattggccaagaccgacgctttttagttgagggcatg
ccagagctcgaagcgtatttccactaccgttatctcgacgttagtaccatcaaggaactg
actcgacgttggtcacctgacttactcgagggcctcaacaaaaaaggcagtcatttggcg
ttggacgacattcgcgattcgattgctgagttaaagtattatcgacaacacgtgtttaaa
atttga
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