Vibrio sp. HB236076: AB0763_02150
Help
Entry
AB0763_02150 CDS
T10847
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vih Vibrio sp. HB236076
Pathway
vih02024
Quorum sensing
vih05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB0763_02150
05111 Biofilm formation - Vibrio cholerae
AB0763_02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vih03000
]
AB0763_02150
Transcription factors [BR:
vih03000
]
Prokaryotic type
Helix-turn-helix
PadR family
AB0763_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PadR
Vir_act_alpha_C
HTH_34
TrmB
HTH_45
Acetyltransf_2
HTH_ABP1_N
Motif
Other DBs
NCBI-ProteinID:
XDK25467
UniProt:
A0AB39HC12
LinkDB
All DBs
Position
1:complement(446778..447320)
Genome browser
AA seq
180 aa
AA seq
DB search
MSLPHVILTVLSTKDATGYDITKEFSSSIGFFWKASHQQVYRELNKMADKGLVTCVLEPQ
EGKPDKKIYSITEQGREALRDWFDNSTQHPTTRDEFCAKLMACSVQTAAPFVTLMRDQIE
ETAKFIAHAEEVESAYYPNQHILDKQARLERLTLRRNLLLRKAWLEWAQEVVNELELMAA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttattttgaccgtacttagtacaaaagatgccaccggctacgac
atcacaaaagaattctcatcaagcattggcttcttttggaaagcgagccaccagcaagtc
taccgcgaattgaacaaaatggccgacaaaggcctcgttacttgtgtattagaaccgcaa
gaaggcaaaccagacaaaaagatctactccatcacagaacaaggccgtgaagccctgcgc
gattggtttgataacagcacgcaacacccgaccactcgcgatgagttttgtgccaaacta
atggcgtgttctgtacagacggcggcgcctttcgtcaccttgatgcgtgatcagattgaa
gaaaccgctaagtttattgctcatgctgaagaagtagaatcggcgtactacccaaatcag
cacattctcgacaaacaggcgagacttgagcgcttgaccttaagacgcaatttactgctg
cgcaaagcgtggttagagtgggctcaagaagtggtcaacgaactggaattgatggccgct
taa
DBGET
integrated database retrieval system
