Vibrio sp. HB236076: AB0763_02635
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Entry
AB0763_02635 CDS
T10847
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
vih Vibrio sp. HB236076
Brite
Messenger RNA biogenesis [BR:
vih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB0763_02635 (csrD)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDK25561
UniProt:
A0AB39HHG5
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Position
1:585563..587584
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AA seq
673 aa
AA seq
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MRFTPTLKLSQRLVAFVTVIVVSAMFILFLGGTLSFQRLGQEYMTHYLQRIVNVVDQEMQ
DAQDADAMKQWLPKLLQASNVVEMEISSPAAVVYQFKSTLPQYIESQRLYHHEFALPHNS
NYTISLHAIPPYVGYSYSFGAMWSITFAVVLVIFCLLKGVKWLREQLLGSELLEERGRMI
LAGRVEENAKGDEREWPFTASDALTRLIEELQDARQERSRFDTFIRTQTFLDRLTGSANR
ILFDSKLESALQESNSFGSVIQVRVQEWKTVQEQHSEQEADQFLIDLGRLLSKQVQRYPE
AVFSRYFTADFAIMIPHLTDKEVSAVCQQMIKKLDQVTPLDALESDNWVHIGVTHYREGE
RQNLIMDEVDMALKSAELQGHNGWSRYQKWAEDTPTRGSVRWRTLLDQAMQTDKIYLFKQ
SAYLCQSGGGRELIHQEVTCRIYDPDHGIVKASRYLTALKQIGYETVMDKAVLNQMLNLL
KQDKLAEVDYSLNLHVLPFRDPAYQRWFRDLMLQVPSRLRQRLSFEFIEANFVRYLDTMR
PVARLIRGLGCELLIGQAGRTIVSSHYIKELDVQFIKLHRNLVKNIDERPENQLFVRSMI
GSVTNSQTQVIAVGVERRQEWQTLQELGVDGGQGRYFDQESPLWPEQLPRLTHKTSKPKT
QVKLGRRNRWKKA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaccccgacattaaaactcagccaacgcttagtggctttcgttactgttatt
gttgtcagtgccatgtttattctcttcctcggcgggaccttgtcgtttcagcgtttggga
caagagtacatgacccattatctgcagcgcatcgtcaatgtggttgaccaagaaatgcaa
gacgcgcaagacgccgatgccatgaaacagtggctgccaaagctattgcaggccagtaac
gtggtagagatggaaatctcatcgccggcggcggtggtgtatcagtttaaaagcacctta
ccgcaatacattgagtctcagcgcctctatcaccacgagtttgctttgccccacaacagc
aattacaccatttcattacacgccattccgccttacgtgggatatagctattcgtttggc
gcgatgtggtcgatcacttttgcggtggtgctggtgattttttgcttgctcaaaggggtg
aaatggctacgagaacaattgcttggctctgaattactcgaagagcgcgggcgtatgatc
ctcgctggccgagtcgaagaaaacgccaaaggcgatgagcgcgagtggccctttaccgcg
tctgatgccttaacccgtttgatcgaagagctgcaagatgcccgtcaagagcgcagccgt
tttgatacctttattcgcacgcaaacctttttagaccgcttaaccggcagcgccaatcgc
atcttattcgacagtaaactcgaatcggcgttgcaagagagcaacagctttggttcggtg
attcaggtgcgagtgcaagagtggaaaaccgttcaagagcaacacagcgaacaagaggca
gatcagtttttgatagacctaggccgtttgttgtcaaagcaagttcagcgttatccggag
gcggtgttttcgcgttacttcaccgccgattttgccattatgatcccgcacctcaccgat
aaagaagtcagcgcagtgtgccagcaaatgatcaaaaagttggatcaagtgactccgctc
gacgccttggaaagcgataattgggttcatattggcgtgacccattatcgcgagggcgag
cgacaaaatttgatcatggatgaggtcgacatggcgctaaaaagtgctgagttgcaaggg
cataacgggtggagtcgttatcaaaagtgggcggaagacacgccgacccgaggctctgtg
cgctggcgtacactgctggatcaggcgatgcaaaccgataagatttacctgtttaagcaa
agcgcttatttgtgccaaagcgggggcggccgcgaattgattcaccaggaagtgacctgt
cgcatttacgatcccgaccatggcatcgtcaaggcctcgcgctatttgaccgcccttaag
caaattggttatgagacggtgatggacaaggcggtgctcaatcaaatgttaaacctgctt
aagcaagacaagctcgccgaggtcgattactcgcttaacttacacgtgttgccgtttcgc
gatcccgcttaccaacgctggttccgcgatttgatgctgcaagtgccaagtcgtctgcgc
cagcgtttgagctttgagtttattgaagccaattttgttcgctacctcgatacgatgcga
ccggtggcgcgtttgattcgcggattgggctgcgagctgttaattggccaagcggggcgc
acgattgtcagcagtcactacatcaaagagctcgatgttcagtttattaaactgcatcgc
aacttggtcaaaaacattgatgaacgtcctgaaaaccaattgtttgtccgcagtatgatt
ggctcggtgaccaacagccaaacgcaggtgattgccgtgggcgtcgagcgtcgtcaagag
tggcagacgttgcaagagttgggggtggatggtggtcaggggcgttactttgatcaagaa
tcccccttgtggccagagcaactgccgcgtttgacgcacaaaaccagtaagccgaaaacc
caagtgaaactcggtcgccgcaatcgctggaaaaaagcataa
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