Vibrio sp. HB236076: AB0763_04700
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Entry
AB0763_04700 CDS
T10847
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vih Vibrio sp. HB236076
Pathway
vih02020
Two-component system
vih02040
Flagellar assembly
vih05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB0763_04700
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AB0763_04700
09142 Cell motility
02040 Flagellar assembly
AB0763_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vih03021
]
AB0763_04700
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vih02035
]
AB0763_04700
Transcription machinery [BR:
vih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB0763_04700
Bacterial motility proteins [BR:
vih02035
]
Flagellar system
Flagellar assembly proteins
Stator
AB0763_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_10
GerE
MarR_2
HTH_28
Rv2175c_wHTH
MarR
WH2
Motif
Other DBs
NCBI-ProteinID:
XDK25944
UniProt:
A0AB39HI87
LinkDB
All DBs
Position
1:1055295..1056032
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AA seq
245 aa
AA seq
DB search
MNKALTYGQAVNPQSQRDFIEKYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLIEARK
NYDGSKGASFETYAGIRIRGAMLDDIRKGDWVPRSVHKNNRDINQAIAELEAKLNRDPSD
AEIAQHLDMSLAQLHAMQSDINSSRLVGIEDLGVAEDTIGRVDDDQAMDNPFKHVADESF
RMALVDAIKQLPERESVILSLYYDEELNLKEIGAVLGVSESRVSQILSQSMQRLRTKLSE
WTKNK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgctgacatacggccaagcagtaaacccgcaatcacaacgagattttatc
gaaaagtattctgtgcttgttaagcgtattgctcatcatttactcggccgcttgccacca
agtgttcaggtagaagatttaatacaagcggggatgattggcttaattgaagctcgcaaa
aactatgacggctcaaaaggggccagttttgaaacttacgcgggaattcgaattcgaggc
gcaatgctcgatgatattcgcaagggagattgggtacctaggtcggtgcacaagaacaat
cgcgatattaaccaagccattgcagaattagaagcgaagctaaaccgcgacccaagcgac
gcagaaattgcgcagcatctcgatatgtcactcgcacaattgcatgctatgcaatcggac
attaacagctcacgtttggtgggaattgaagatttgggggtagcggaagataccatcggt
cgcgtagatgatgaccaagctatggataatccatttaagcatgtggctgatgaatcgttt
cgcatggcacttgtcgatgcaattaagcaacttccagaacgcgagtctgtgatactatca
ctttattatgatgaagaattaaatttaaaagaaatcggtgcagtattaggagtgagtgaa
tctcgcgttagtcagatactaagccagtcaatgcagcgtttgcgcactaaactcagtgag
tggacaaaaaataaataa
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