Vibrio sp. HB236076: AB0763_05620
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Entry
AB0763_05620 CDS
T10847
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vih Vibrio sp. HB236076
Pathway
vih02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AB0763_05620 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vih02000
]
AB0763_05620 (msbA)
Enzymes [BR:
vih01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AB0763_05620 (msbA)
Transporters [BR:
vih02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AB0763_05620 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
APS_kinase
RsgA_GTPase
AAA_18
AAA_25
AAA_29
EMC3_TMCO1
Zeta_toxin
AAA_30
nSTAND3
MMR_HSR1
DEAD
AAA_15
AAA_5
HUTI_composite_bact
ABC_membrane_2
ATPase
AAA_24
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
XDK26116
UniProt:
A0AB39HJ25
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All DBs
Position
1:1277018..1278775
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AA seq
585 aa
AA seq
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MSQEYDESTWQTFKRLWKYIRLYKSGLAVAVVALIINATADTYMISLLKPLLDEGFGNAE
SNFLRTLPFIIFAMMIIRGTSGFISTYCLSWVSGNVVMQIRRMVFNHFMQMPVSYFDREK
TGTLLSRITYDSEQVSAATSRALVSIVREGASIIGLLALMFYNSWQLSLVLIVVAPVVAW
AISVVSKRFRKVSKNMQSAMGVVTTSAEQMLKGHKEVLTYGGQDVERERFEKVSNRMRQQ
SMKLVTAQAAANPIIQIIASVAIFAILYLASIESIKQELSAGTFTVIFSAMFGLMRPLKA
LTNVTSQFQRGMAASQTLFSLIDLEPELNHGTYRSDKVQGDVSVRNVTFSYQESSHKALD
EISFDIPPGKTVALVGRSGSGKSTIASLLTRFYEINEGTITLDGRDIRDYDLKNLRTHFG
LVSQHVHLFNDTIANNIAYAANERYSREQIVKAAKLAYAHDFIEGLENGYDTEIGENGAS
LSGGQRQRIAIARALLRDAPVLILDEATSALDTESEKAIQSALDELQRDKTVLVIAHRLS
TIEKADQILVVDDGKIVERGTHEALLDADGAYAQLHRIQFGGDEV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaatacgatgaatcgacctggcagacgtttaaacgtctatggaaatacatt
cgcctttacaagtccggtctggctgtagctgtggtcgcattaattattaatgccacggca
gatacctatatgatttctctattaaagcctttacttgatgaaggttttggcaacgcggag
tcaaattttttaagaacactgccatttattatctttgcgatgatgattattcgtggcacc
agtggctttatttcgacttattgcttgagttgggtatcgggtaatgtcgtgatgcaaatt
cggcgcatggtgttcaaccacttcatgcaaatgccggtgtcttattttgaccgtgaaaaa
accggtactttattgtcgcgtattacttatgactctgaacaagtttccgctgccaccagt
cgtgccttggtcagtattgtccgtgaaggggcaagtattattggcctattggcgctgatg
ttttacaacagctggcagttgtctttggtacttatcgtggttgcccctgtcgttgcttgg
gcgatcagtgtggtctctaagcgctttagaaaagtctcaaaaaatatgcagtcggcgatg
ggcgtggtgaccacctctgcagagcaaatgctcaaagggcacaaagaagtcctgacttat
ggcggtcaagatgttgagcgagagcgttttgaaaaagtgagcaatcgcatgcgtcaacaa
agcatgaaattggtcaccgctcaggcggcagccaacccgattattcaaattattgcttca
gttgcgatctttgctattttgtatttggccagtatcgagtctattaaacaagagctatca
gcagggacttttacggtcattttctcagccatgttcgggttgatgagaccactcaaagca
ttgactaacgtgacctcgcaattccaacgcggtatggcagcgagtcaaaccctgttttca
ctcatcgacttagagccagagcttaatcacggtacgtatcgcagtgacaaagtccaaggc
gatgtcagtgtgcgcaatgtgaccttttcttaccaagaatcaagccacaaagctttagat
gaaatcagttttgatattcctccaggaaaaacggtggcgttggtggggcgttctggatcg
ggcaaaagtaccattgccagtttgctcacccgtttttatgaaattaacgagggcacgatt
acactcgatggccgcgacattcgcgattacgatctgaaaaatttgcgcacccatttcggt
ttggtgtcgcaacatgtgcatctttttaacgatacgatagccaataatattgcttatgct
gccaatgagcgttattcacgtgaacagatcgtgaaagcggcaaagttggcttatgcacat
gattttattgaggggcttgagaatggctacgacaccgaaattggcgaaaatggcgccagt
ttgtcaggtggacaacgacagcgcattgcgatagctcgtgcgttgttgcgagatgcgccg
gtgctgattttggatgaggccacctctgcattagacacagaatctgaaaaagcaattcaa
tctgcgcttgatgaactgcagcgcgataaaaccgtgttggtgattgctcaccgtttatca
acgattgaaaaagcagatcaaatcttagtggtcgacgatggcaagattgttgaacgcgga
acccacgaagcattattagacgccgatggggcttatgcgcaattgcatcgcattcaattt
ggtggagacgaagtgtga
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