Vibrio sp. HB236076: AB0763_07445
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Entry
AB0763_07445 CDS
T10847
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03030
DNA replication
vih03430
Mismatch repair
vih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB0763_07445
03430 Mismatch repair
AB0763_07445
03440 Homologous recombination
AB0763_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vih03032
]
AB0763_07445
03400 DNA repair and recombination proteins [BR:
vih03400
]
AB0763_07445
Enzymes [BR:
vih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB0763_07445
DNA replication proteins [BR:
vih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB0763_07445
DNA repair and recombination proteins [BR:
vih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB0763_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
XDK26347
UniProt:
A0AB39HFZ8
LinkDB
All DBs
Position
1:1692884..1693600
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AA seq
238 aa
AA seq
DB search
MPSFFKPPMVQWPLKFEQKLMRTQSPMLRAFYQTPLPNATTPLAEVPFVALDFETTGLDP
RKDDIITIGLVPFDLNRIYLNQARHWTLRPSRNLDEKSIVIHGITHSDIQDAPDLIEVLP
TLLNALAGKITVVHYRRIEREFLNNAVKNRIGEGIEFPVLDTLDIEQRIQEKLTGGLWNQ
LKGKKPASVRLGQSRQRYGLPYYSPHHALTDAIATAELLQAQIAHFYKAAKPVGELWR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atcccatctttcttcaagccgcctatggtgcaatggccgttaaagttcgagcaaaaactc
atgcgaacccaatcgcccatgttgcgtgcgttttatcaaacgccactgccaaacgcgacc
acgcctttggcagaagtgccgtttgtcgctcttgattttgaaacaaccggccttgacccg
cgcaaagacgacatcattaccattgggctggtcccttttgatctcaaccgcatttacctc
aatcaggcacggcattggaccttgcgccctagccgtaatctcgatgagaaatcgattgtc
attcatggaattacccatagtgatattcaagacgcgccagatttaatcgaagttttaccc
acgttgttaaacgcgctagcaggtaaaattaccgtggtccactatcgccgtattgaacgt
gaatttttgaataatgcggtgaaaaatcgcattggggaagggattgaatttcccgtgctc
gatacgttagacattgagcagcgcattcaagagaaactaaccggcggtttgtggaatcaa
ctcaaaggcaagaagccggcttcagtgcgcttaggacaaagtcgccaacgctacgggctg
ccttattattcaccgcaccacgcccttaccgatgccattgctaccgctgaattgctgcaa
gcgcaaattgctcacttttacaaagcggccaaaccagtcggcgagctgtggcgctag
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