Vibrio sp. HB236076: AB0763_10830
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Entry
AB0763_10830 CDS
T10847
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB0763_10830 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vih03019
]
AB0763_10830 (pnp)
03016 Transfer RNA biogenesis [BR:
vih03016
]
AB0763_10830 (pnp)
Enzymes [BR:
vih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB0763_10830 (pnp)
Messenger RNA biogenesis [BR:
vih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB0763_10830 (pnp)
Transfer RNA biogenesis [BR:
vih03016
]
Prokaryotic type
tRNA degradation factors
AB0763_10830 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
XDK24683
UniProt:
A0AB39HFJ1
LinkDB
All DBs
Position
1:complement(2479220..2481361)
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AA seq
713 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGIIARQATAAVMVTMDDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDSFKNEVQVIATVVS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSNTELENSKLDLVV
AGTESAVLMVESEADNLTEEEMLSAVVYGHDQQQTVISAINEFAAEVATPAWDWVAPAEN
TELKAKIAQLAEAQLVEAYQITEKMARYERIGQISAQVSETLLAEDDTLNPKEIHTIFHD
LEKTVVRSRIISGQPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQAMVTATLGTQ
RDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNEGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AIAGARDDISEFAPRIHTMKISAEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAA
TEGTAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLSEGQEVKVKVLEIDRQNRVRLSMKEAVEKPAEEAEQAPASADNAGE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaacccgtagtaaaaacgtttcaatacggtaatcataccgttactttagaa
actggtattatcgcacgccaagccaccgctgctgtgatggtgaccatggatgacactgct
gtattcgtttcagtggttggtaaaaaagaggccgttgaaggccaagatttcttcccatta
acggttaactaccaagagcgtacttacgcggcaggtaaaatccctggtggtttcttcaaa
cgcgaaggccgtccttcagaaggcgaaacattaaccgctcgtcttatcgaccgcccaatc
cgcccactgttcccagattcgtttaaaaacgaagttcaagtgattgcgacagttgtctcg
gtgaaccctgatgttcaacctgacattgttactatgattggtacgtctgcggcattggcc
atttcaggcattccatttaacggcccaatcggtgcggcgcgcgttggtcatatcgatggt
cagttagtgttaaacccgagtaacacagagcttgaaaactctaaactagacttagtggtt
gcgggtactgaatcggctgtattaatggttgaatccgaagcggataacttaacagaagaa
gaaatgctctctgctgtggtttacggccacgatcaacaacaaacggtgatcagcgccatt
aatgagtttgctgcagaagtcgcaacaccggcatgggactgggttgctccagcggaaaac
actgagctgaaagcaaaaattgcacagctagcagaagcgcaattggtcgaagcgtatcag
atcactgaaaagatggcgcgttatgaacgcattggtcaaatcagtgctcaagtcagcgaa
acgctattggcggaagatgacacgcttaacccgaaagagatccacacgattttccacgat
ctagaaaaaaccgttgttcgcagccgtattatttctggtcagccgcgtattgatggccgt
gaaaaagacatggttcgcgctttggatgttcgtacgggtgtacttcctcgtacccacggt
tcggctttgttcactcgtggtgaaacccaagctatggtgaccgcgacgcttggtacccag
cgcgatgctcaaattatcgatgagttgaccggtgagcgtaaagaccacttcttgttacac
tacaacttccctccatactgtgtgggtgaaacgggctttgtcggttcacctaagcgtcgt
gaaattggtcacggtaaactggctaaacgcggtattgctgcggtaatgccatcggttgat
gaattcccatacacagtgcgtgttgtatcggaaattaccgagtctaacggctcttcatca
atggcttctgtatgtggtacttcccttgctcttatggatgcaggtgtgccaattaagtca
tccgttgccggtattgcgatgggcctagtgaaagaaggcgatgattttgtcgtgctgtct
gacatcttaggtgacgaagaccacttaggtgatatggactttaaagttgcgggtaccaat
gaaggtattactgcgctacaaatggatatcaagattgaaggtatcacgaaagagatcatg
cagattgcgctaaatcaagcacaaggtgcgcgtaagcacatcctatctgtcatggatcaa
gccattgctggcgctcgtgatgatatctctgagtttgctcctcgtatccacacgatgaag
atcagtgctgaaaagatcaaagacgttatcggtaaaggcggtgcggttattcgtcaattg
acagaagaaaccggtacaacgattgaaatcgaagatgacggtaccatcaaaattgcagca
accgaaggaacagcggcaaaagaagcgattcgccgtatcgaagaaatcaccgcagaagtt
gaagttggccgcatctacacaggtaaagttgctcgccttgctgactttggtgctttcgtg
accatcttgcctggtaaagatggcttggtacacatttctcaaattgcggataaacgcgtc
gagaaagtctctgactacttgagcgaaggccaagaagtaaaagtgaaggtcttggaaatt
gaccgtcaaaaccgcgtgcgtttgagcatgaaagaagcggttgagaaaccagcagaagaa
gcagaacaagcgccagcatcggcagataatgcaggtgaataa
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