Vibrio sp. HB236076: AB0763_11020
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Entry
AB0763_11020 CDS
T10847
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB0763_11020 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vih03019
]
AB0763_11020 (pcnB)
Enzymes [BR:
vih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AB0763_11020 (pcnB)
Messenger RNA biogenesis [BR:
vih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB0763_11020 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
XDK24717
UniProt:
A0AB39H9U1
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All DBs
Position
1:2524354..2525712
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AA seq
452 aa
AA seq
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MHMNTNDNITDEHLQRPELSLNVFTREEHNISRKQISENALKVLYRLHSAGFDAFLVGGG
VRDLLLGLTPKDFDIATNATPEQIKQLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHD
QSNDKTSLQSKEGMLLRDNVYGTIDEDAERRDFTVNSLYYSIADYSIHDYARGVEDLEER
LIRLIGDPDKRYREDPVRMLRAIRFAVKLDFDIEEETAAPIEELAGLLKDIPAARMYEES
LKLLQSGQGLETYHLLREYGLFQQMFPVIAEHFTEQYDSATEQMLDIVLDSTDQRILEGK
RINPAFMFAAMLWYPLISLSNKLEKELNLNAYDAMMEASNVILDAQVKTIAIPRRHTTTI
RDIWVLQMRLMRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETQELAKWWDTFQQAGR
NMRQAMVNDINEPGSSKPRRRRRNTSKKKPKA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgaatacaaacgataacatcacagacgaacacctccaacgcccggagctctca
ttgaacgtgttcactcgcgaagaacacaatatctcgcgtaaacaaatcagtgaaaatgca
ctcaaagtcctgtatcgccttcatagtgcaggctttgatgcctttctcgttggcggcggt
gtccgcgatttactgcttggcttaacgccaaaagattttgatatcgccaccaatgcaaca
ccggagcaaatcaaacagttgtttcgcaattgccgtcttattggtcgtcgctttcgtctt
gcccatattatgtttggccgcgatatcattgaagtcgcgacatttcgcggtcatcacgat
caatcgaatgataaaacgtctttgcaatccaaagagggtatgctgttaagagataacgta
tacggcactatagacgaagatgcggaacgacgcgactttacggttaactcgctttactac
agcatcgctgattattcgatccacgactacgctcgaggtgttgaagacttagaagagcgc
ctgattcgcctcatcggtgaccccgataaacgctaccgagaagatccagtgcgtatgctg
cgagccattcgctttgcggtgaaactcgactttgatatcgaagaagaaaccgccgcgccg
attgaagagcttgccgggctactcaaagacattcccgcagcgcgtatgtacgaagaatca
ttaaagttattgcaatcaggacaagggctagagacctaccatctgctgcgtgaatacggt
ttgtttcaacagatgtttcccgttattgctgagcactttaccgagcaatacgactcggcg
acagagcaaatgctcgatatcgtactcgattcaacggaccaacgtattctcgagggcaaa
cgcatcaaccctgctttcatgtttgccgcaatgctgtggtacccattgatatctctttcg
aacaagctagaaaaagagttaaacctcaatgcctacgacgccatgatggaagcgagcaat
gtcattttagatgcacaagtaaaaaccattgctattccgcgccgtcataccacgaccatt
cgcgatatttgggtattgcaaatgcgcttgatgcgccgcagcggtaaacgcgcttttcgc
ttgctcgagctcaataaattcagagccggttttgactttttggaaatgcgcggcgagatc
gaaggcggtgaaacacaagaattggccaagtggtgggataccttccaacaagcgggtcgc
aatatgcgccaagccatggttaacgacatcaacgagccaggtagcagcaagccgcgccgc
cgccgtcgcaataccagtaaaaagaaacccaaagcatga
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