Vibrio sp. HB236076: AB0763_12665
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Entry
AB0763_12665 CDS
T10847
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vih Vibrio sp. HB236076
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vih03021
]
AB0763_12665 (rpoH)
Transcription machinery [BR:
vih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB0763_12665 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
XDK24985
UniProt:
A0AB39HEA0
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All DBs
Position
1:complement(2877511..2878365)
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AA seq
284 aa
AA seq
DB search
MTDQMYPMALVSQDSLDSYIRSVNSYPMLSADEERDLAERLHYQGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKKRLGWFNSGEVETVAKELGVEPAEVREMESRLAAIDS
TFELQNDDDENQSYTAPMLYLEDKASDVADNIEQDNWQNHTHQRLGLALQSLDERSQHIV
RSRWLDDNKATLQDLADMYNVSAERIRQLEKNAMKKLKQAVGEL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaaatgtatcctatggctctcgtatcgcaagatagcttagacagctatatt
cgttcagtgaacagctaccctatgttgtcagcggacgaagagcgtgatcttgcagagcgt
ttacattatcaaggcgaaatcgaagcggcgaaagggctgatcctttctcacttgcgattt
gttgttcatgtcgctcgtggctattccggttatggtttgcccatggctgacctcgttcag
gaaggcaatataggcctaatgaaagcggttaagcgctttaatcccgaagtcggggtgcga
ctggtgtcgtttgcagtacactggatcaaagctgagattcacgagtacgttctgcgcaac
tggcgtatcgttaaagtggccacgaccaaagctcagcgcaagctgttcttcaatttgcgc
aagtcgaaaaagcgtttaggttggtttaacagcggtgaagttgaaaccgttgccaaagag
ctcggcgttgaacctgctgaagttcgtgaaatggaatcccgcctggcggcgattgattca
acgtttgagttgcaaaacgacgacgatgaaaatcaatcttacactgcaccgatgctttat
ttagaagataaagcttctgatgtggccgataatatcgagcaagataattggcaaaaccac
actcaccaacgcttggggttggcactgcaaagcttggatgagcgcagccaacacatcgtt
cgctctcgctggttagatgacaataaagcgacgctgcaagatttggccgatatgtacaat
gtctctgctgagcgcattcgacagcttgagaaaaatgccatgaaaaagctcaagcaagcc
gtaggtgaattgtaa
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