Vibrio sp. HB236076: AB0763_12740
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Entry
AB0763_12740 CDS
T10847
Name
(GenBank) EAL domain-containing protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vih Vibrio sp. HB236076
Pathway
vih05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AB0763_12740
Enzymes [BR:
vih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AB0763_12740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
GGDEF
FIST_C
Motif
Other DBs
NCBI-ProteinID:
XDK24999
UniProt:
A0AB39HFK9
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All DBs
Position
1:complement(2891096..2893582)
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AA seq
828 aa
AA seq
DB search
MDTSSFLVECSDQLVECLAEIEHIEHSSPFIQIFSTQTAAEVFPYTRLLLERFPDAQLIG
HSTRQLIDGNQLVNEGTLIVMSFFDSVCYVPVVVHHSSDYQRESSVAQQAFQGVADLKAI
VCFTTQNHYQYDLFLHGLNTFGSVSGGLALPNNSEHAYVIAQDQVYLQSSVLIGLVSQPL
KVWTQLHSEWNPIGLPMQVTKAEGNRVYQLNYRPAYDVYRQYLSDGAHVDWQTLANFPLY
HTQDGQDRYLRIAQVFDDGSVLLEAPLEQDQYVQFCFNHPSLTLEQLAQGVEDLALRQPE
SIWVYNCISRLDFLDGSQEVRSFNGVAQAYGSYTNGELFNDGSGNRIHHHSLTYIALRES
FDVTDIKKPIKPASSSMSPLFHLVRNALDDVKRQSLHLEYQINKQAQKLEHNTRIDSRTG
LPNRTALQQHLPVMRADEQLMTIKLQNFSQINDKYGYSVGDQLLREISLYLAAHLRKHIG
QESDSHLYSIGIGEWGYVFRSRSDMSSCKQAFMEFADQIEQHNFRLPGLSSIDYLSVSIC
SGLIRLCDYPDLSPDALLLRAIEARKVASKNNLLFCNAKDIEENDTARKQRLVWFDKVTQ
AILQHKVMAYCQPIVHANSHELFSLECLVRILESDGSVISPGQFLPMIQDTHLYTRLSRQ
MINYTFEHMGQRQENFTINLSAQDLLSNQNLYHLEAAIQQLDNPHRVGIEVVESEQIHNY
GRMLEVCGHFRRLGARIIVDDFGSGYSNIDEIIKLEPEIIKLDGSLVRTIDKDAKQCKIV
EQLIRLCQVFNAKTVAEFVHNQDVCQRVEAMGVDYIQGYYIDAPSPLK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggatacgagttcctttttggtggagtgcagtgatcaattggtggaatgcctggcagaa
atcgagcacattgagcattcctcaccgtttattcaaattttctctactcaaacagcggct
gaggtttttccttatacacgtttactattagaacgcttccccgacgcgcagttaatcggc
cacagtactcgacaattgattgatggtaatcagttggtaaatgagggcacgttgattgtg
atgagtttttttgattcggtgtgctatgtaccggttgttgttcaccacagtagtgattat
caacgtgaatcgtccgttgcacagcaagcatttcaaggggtggccgatctgaaggccatc
gtctgctttaccactcaaaaccattatcaatacgatcttttcttgcacggcctcaatacc
tttggctcagtgtctggcggccttgccctgcctaacaacagcgaacacgcctatgtcatt
gcacaagaccaagtgtatttacaaagcagcgtattaatagggctcgtgagtcaaccactt
aaggtgtggacgcaacttcactcggaatggaacccgattggtctgccgatgcaagtcaca
aaagcggaaggcaaccgagtgtaccagctcaattatcgtccggcttatgatgtgtatcgt
caatatcttagcgatggtgctcatgttgattggcaaaccctggcgaactttcccctttat
cacacccaagacgggcaagatcgttacctgcgtatcgcgcaagtgtttgatgatggcagt
gtgttgctggaagcgccactagagcaagatcaatacgtgcagttttgttttaatcacccc
tctctcacgcttgagcagttggcccaaggcgtggaagatctcgcgcttcgtcaaccggaa
agtatttgggtctacaattgtatatcaaggctcgactttttagatggctcacaagaagta
agatcgtttaacggtgtggcgcaagcgtatggtagctacactaatggagagctgttcaac
gatggcagcggcaatcgtattcatcaccacagcttgacttacattgccttgcgtgagtct
tttgacgtcaccgacattaagaaaccgatcaagccagcgagtagctcaatgtcgccgcta
tttcacttggtacgcaatgcgctagatgatgtgaaacgtcaatcgctgcatctagagtac
caaatcaacaaacaggcccaaaagctcgaacacaatactcgcattgattcacgaaccggt
ttacccaatcgcacagccttacaacagcacttgcccgtgatgagagctgacgagcaactg
atgacgattaagttgcaaaactttagtcaaatcaatgataaatatggctattctgtcgga
gatcagttgttgagagaaatctcgctgtatctcgctgcgcatttgcgcaaacacatcggt
caggaaagtgacagtcacttgtacagtattgggattggcgaatgggggtatgtgttccgc
tctcgcagcgatatgtcgagctgtaaacaggcgtttatggagtttgcagaccaaattgag
caacacaattttcgtttacccggtttgagttcgatcgattatttgtccgtatcgatttgc
agtggtttaattcgcctgtgtgattaccctgacttatcacctgacgctttgctattgagg
gccattgaagctcgcaaggtggccagcaaaaataaccttcttttttgtaacgcaaaagac
atcgaagagaatgatactgcgcgaaaacagcgtttagtgtggtttgataaggtgacacaa
gcgatcttacaacacaaggtgatggcttattgtcagcccattgttcacgccaacagccat
gaattattctcgctagaatgcctggttcgtattttagaaagcgatggcagtgtgatcagc
ccgggtcagtttttgcctatgattcaagatacccatttgtacactcgcttgagccgtcaa
atgatcaattataccttcgaacacatggggcaacggcaagaaaacttcaccattaattta
tcggctcaagatttactgagcaatcaaaacctttatcaccttgaagcggccatccaacaa
ctcgacaatcctcatcgcgtgggcattgaagtcgtggagtcagagcaaattcacaactac
ggacggatgctcgaagtgtgcgggcatttccgccgcttgggcgcgcgtattatcgtcgat
gattttggctcgggttattccaacattgatgagataatcaaattagagccagagattatt
aagctcgatggctctttggtccgcaccatagataaagatgccaagcaatgtaaaattgtc
gaacagttgattcgtctctgtcaggtatttaacgcgaaaaccgttgccgaatttgttcac
aatcaagatgtttgccagcgggtagaagcgatgggcgtcgattacattcaaggttattat
atcgatgcaccaagccctcttaagtaa
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