Vibrio sp. HB236076: AB0763_12765
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Entry
AB0763_12765 CDS
T10847
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vih Vibrio sp. HB236076
Pathway
vih00300
Lysine biosynthesis
vih00470
D-Amino acid metabolism
vih01100
Metabolic pathways
vih01110
Biosynthesis of secondary metabolites
vih01120
Microbial metabolism in diverse environments
vih01230
Biosynthesis of amino acids
Module
vih_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB0763_12765 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB0763_12765 (lysA)
Enzymes [BR:
vih01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AB0763_12765 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XDK25004
UniProt:
A0AB39HDX6
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All DBs
Position
1:complement(2896869..2898122)
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AA seq
417 aa
AA seq
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MDYFNYQEDGQLWAEQVSLEHLAQQHGTPLYVYSRATLERHWNAFDKAAGSHPHLVCYAV
KANSNLGVLNVLARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTRQEMKRALELGI
KCFNVESEPELECLNQVAAEMGVKAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
QVYQFAQSLEHLNIVGIDCHIGSQLTDLAPFIDATDRLLTLIDNLKAQGVNIRHLDVGGG
LGVVYHQEQPPQPAQYATALLERLHQHQDLELIFEPGRAIAANAGVLLTRVAFLKHTEHK
NFAIVDAAMNDLMRPALYQAWQNIVPVSPREGEGNRYDLVGPICETGDFIGKDRQLVLED
GDLLAVRSAGAYGFVMSSNYNTRTRAAEIMVDGDKSYVVRQREELQRLWELEQVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttaattatcaggaagacggccagttgtgggcagaacaagtctccttagag
catcttgctcagcaacatggcacgcctttgtatgtgtattcaagagcgacactagaacgc
cactggaatgcgtttgataaagcggctggttcacatcctcatctggtttgttatgcagtt
aaagcgaactctaacctcggtgtattgaatgttctcgcacgacttggttcaggctttgat
attgtttcaggtggtgagctagagcgtgtgattgccgccggtggcgatgcgaaaaaagtc
gtgttctctggtgtgggtaaaacccgtcaagaaatgaaacgcgcgttagagctagggatt
aaatgttttaacgttgagtctgagccggaactggagtgcttaaatcaagtggctgctgaa
atgggcgttaaagcgccgatttcactgcgtattaaccctgatgttgatgctaaaacgcac
ccttatatttcaactggtttacgcgacaataagtttggtattgcctttgatcgcgcgccg
caagtgtatcaatttgctcagagccttgagcatttgaatattgtcggtatcgattgccat
attggctcgcaattaaccgacctagcgccctttatcgatgcgacggatcgcttgttaacg
ttaattgacaacttgaaggcacagggtgtcaacattcgtcatcttgatgtcggtggtggc
ttaggggtggtttaccatcaagagcaaccgccgcagcccgcgcaatacgcaaccgcatta
ctcgagcgccttcatcagcaccaagaccttgagctgatctttgagccgggtcgagccatt
gccgcgaatgcgggcgtattgctgacacgcgtggcgtttttaaagcacactgaacataaa
aactttgccattgtcgatgctgcgatgaacgatttgatgcgtcccgccctgtatcaagca
tggcaaaacattgtgccggtctcgcctcgtgagggagaaggcaatcggtacgacttggta
ggtccaatttgtgaaaccggtgactttattggtaaagatcgccaactggtactcgaagac
ggagatttattggctgtgcgttcggcgggtgcctatggtttcgtgatgtcttccaattac
aacactcgtactcgagccgctgaaatcatggttgatggcgacaagtcttatgtcgtccgc
caacgtgaagaactgcagcgactatgggaactagagcaagtgctaccggagtaa
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