Vibrio sp. HB236076: AB0763_12910
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Entry
AB0763_12910 CDS
T10847
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03420
Nucleotide excision repair
vih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB0763_12910 (uvrD)
03430 Mismatch repair
AB0763_12910 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vih03400
]
AB0763_12910 (uvrD)
Enzymes [BR:
vih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB0763_12910 (uvrD)
DNA repair and recombination proteins [BR:
vih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB0763_12910 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB0763_12910 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XDK25022
UniProt:
A0AB39HEB4
LinkDB
All DBs
Position
1:complement(2930400..2932571)
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AA seq
723 aa
AA seq
DB search
MDPSLLLDGLNEKQRQAVASPLKNLLILAGAGSGKTRVLVHRMAWLLSVEQASPFSIMSV
TFTNKAAAEMRGRIEELMHGSAGGMWTGTFHGICHRILRAHYLDANLPEDFQILDSDDQQ
RLLKRLIKAQNLDEKQWPARQVSWWINGKKDEGLRPQHIDSYQDPITQTYIQIYQAYQEA
CDRAGLVDFAEILLRCLELLRDKHYIREHYQARFKHLLVDEFQDTNNIQYAWLRLLCGPE
SRVMIVGDDDQSIYGWRGAKVENIEKFTLEFNDVETIRLEQNYRSTKTILEASNTLIANN
TERMGKSLWTDGEAGELISVYSAFNELDEARFAVNKIQQWQDNGGSLNDCALLYRNNAQS
RVLEEALIQSNLPYRIYGGMRFFERQEVKDALGYLRLMSNRNDDSAFERIVNTPTRGLGD
KTLETIRFAARDRGATLWQACQALIDEKVLASRSASALNRFMELIDALEDDSRDMPLHQQ
TDHVIKASGLYAMYEQEKGEKSKARLENLEELVTATRQFEKPEEAEDMTLLTAFLTHAAL
EAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAKEKLYMTYAEMRRLYGQDKYHKPSRFISELPESCYEEVRMKASVSRASQTGRFS
QTAVKESFNETGFQLGQRVVHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAKL
EQI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacccttctcttcttctcgacggtttaaacgaaaagcagcgtcaagccgttgcttca
ccactaaaaaatttattgattttggccggggcgggcagtggtaaaacacgagtattggtt
catcgaatggcctggctactgtctgttgagcaagcgtcgccattttccatcatgtcggtc
accttcaccaataaagccgctgctgaaatgcgaggtcgaattgaggagttgatgcacggc
agtgcgggcgggatgtggacgggtacgttccacggtatttgccaccgtattttaagagcg
cactatctagatgcaaacttaccagaagactttcaaattctcgatagcgatgaccagcag
cgattgttaaagcgtttgatcaaagctcagaatttggatgagaagcaatggccagcaagg
caagtgtcatggtggattaacggtaaaaaagacgaggggttaaggcctcaacacatcgac
agttaccaagaccccattacgcaaacctacattcaaatttatcaagcttatcaagaagcg
tgtgatcgcgctggcttggttgattttgcagaaattttattgcgttgtttggagttgtta
cgcgacaaacactacatccgcgaacattatcaagcgcgtttcaagcacctgttagttgat
gaatttcaagataccaataacattcaatacgcttggttacgattgctttgtggtccagaa
tcacgggtgatgatcgtcggtgacgatgaccaatctatctatggctggcgcggtgcgaaa
gtagaaaacatcgaaaaattcacgctggaatttaacgacgtagaaaccattcgcctagag
caaaattatcgttcgacgaaaaccattttagaagcgtcgaataccttgattgcgaataat
actgagcgcatgggtaaaagcttgtggaccgatggcgaggctggtgagttgatctcggtg
tattctgcgtttaacgaactcgatgaagcgcgctttgccgtgaataaaattcagcaatgg
caagataatggcggcagcttaaatgactgtgcattactgtatcgcaacaatgcacaatct
cgcgttcttgaagaggctttgattcaatctaacttaccataccgtatttacggtggtatg
cgattcttcgagcggcaagaagtcaaagacgccctaggttatttgcgcttgatgtccaat
cgcaacgatgattccgcttttgagcgcattgttaacacgccaacgcgcgggttaggtgat
aagacccttgaaaccattcgttttgcagcacgcgatcgaggggcaacgttgtggcaggct
tgccaagcactgattgacgaaaaagtgttagcgtcgcgctcggcttcggcattaaatcgc
tttatggagttgattgatgctttagaggatgattctcgcgatatgccattgcatcaacag
acggatcacgtgatcaaagcgtctgggttgtacgcaatgtatgagcaagaaaaaggtgaa
aagtccaaagcacgcttggaaaacttagaagagctggtgacagccactcggcagttcgaa
aagcccgaagaagcggaggacatgacgttattaacggcgtttcttacccatgccgcctta
gaagcaggggaagggcaagccgatgaatttgatgatgccgtacaattgatgacactgcac
agcgccaaagggctcgagtttcccttggtctttatggttggcgttgaggaagggatgttt
ccaagccaaatgtctgccgaagaggcgggccgtttggaggaagagcgccggttgtgttat
gtcggtatgacgcgagcgaaagaaaagctgtatatgacctatgctgaaatgcgtcgttta
tacggccaagataaataccataaaccgtcgcgatttatcagtgaattaccagaatcctgt
tacgaagaagtccgtatgaaggccagtgtgtcacgtgcttcacaaacagggcgctttagc
caaaccgcagtcaaagaaagctttaacgaaacgggttttcaattaggccagcgcgttgta
caccccaagtttggcgaagggaccattatcaattttgaaggcagtgggccgcaaagccgg
gtacaagtcgccttcaatggcgaggggatcaagtggttagtgacggcttacgccaagcta
gaacagatttag
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