Vibrio sp. HB236076: AB0763_13710
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Entry
AB0763_13710 CDS
T10847
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vih Vibrio sp. HB236076
Pathway
vih03420
Nucleotide excision repair
vih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB0763_13710
03430 Mismatch repair
AB0763_13710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vih03400
]
AB0763_13710
Enzymes [BR:
vih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB0763_13710
DNA repair and recombination proteins [BR:
vih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB0763_13710
MMR (mismatch excision repair)
Other MMR factors
AB0763_13710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C
AAA_30
AAA_16
DUF4058
Motif
Other DBs
NCBI-ProteinID:
XDK26837
UniProt:
A0AB39HJI7
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Position
2:complement(103711..105585)
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AA seq
624 aa
AA seq
DB search
MKGINVDEVIYSCLNLDAPKSFFLFAGAGSGKTRSLVEVLKRFREQNIHRLRVNAQQVAI
ITYTNAACDEIKRRLEFDPSFSVSTIHSFAWELIKPHPNDIRGMLKASLQTDIKELEEAQ
RKGREGTKAAEDRRRQIASKQRRLGSLDRVRKFSYNPNGGNTGSDSLSHSEVIGMTAELL
TNKPLLQQILIRKFPILLVDESQDTKKELIEALFAVQASHKEQFSMGLFGDVMQRIYNDG
KEHLGQDLPDDWLTPKKEYNYRCPRRVVKLINRIREDVDQNVQLPAKDAEGFVRLFIANT
KDEIDKAVFEESICQEMANITGDELWIEDRKNRKTLTLEHHMAARRGGFSSFFDPLYAID
KLRTSLLDGTHACITLFSGRVLPLIDNLKSGNKFAVSRIVNKYSPLISAEHLQVSSNPRA
ELDKAKHAVDSLHGLWDGASEPSLHSILKEIHRSGLFPLPETLAVIATRDEEKEYQEPES
ERDINPTIDAWDNALKAKFSEFKAYVQYISDDSEFGTHQGIKGLEFPRVMVVLDDEEARG
FLFSYDKLFGAKPLSETDQRNQREGKETGIDRTKRLFYVTCSRAEESLAVIAYTNEPEEV
ARTALQQGWFDEGEIIHLPKTVLE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcattaatgttgatgaggtcatctatagttgtcttaatcttgatgcccctaag
agcttttttctatttgccggagctggctcgggaaaaacacgttcattggtagaagtgcta
aagcgatttcgtgagcagaacatacatcgcttacgagtaaatgctcagcaagtagcgatc
attacatacaccaatgcagcatgtgatgaaatcaagcgtcgtttggagtttgatccaagc
ttcagtgtttcaacaattcatagcttcgcttgggaacttataaaacctcacccaaacgac
attagaggcatgctcaaagccagtcttcaaaccgatattaaagaacttgaagaagctcag
cgtaaaggacgcgaaggtacaaaggcagctgaagacagacgtcgacagatcgcatcaaaa
caaaggcgactgggctcacttgatagagttcggaagttttcatacaaccccaacggaggt
aatacgggcagcgactcacttagccattcagaagtaattggtatgaccgccgaactccta
acaaacaagcctctcttgcaacagatccttattcgcaagtttccaattttacttgtagat
gagagccaggacaccaagaaagagctgattgaggcactctttgctgttcaagcatctcac
aaagagcagttttcaatgggtctatttggggatgtaatgcaacggatctacaacgacggc
aaggagcatttaggtcaagacttacctgatgactggctgactcccaagaaggaatacaac
taccgttgtccacggcgggttgtaaagcttatcaatagaattcgtgaggatgttgaccaa
aacgttcaactaccggccaaagacgcagagggctttgttcgtctatttatcgcaaatacc
aaagacgaaattgataaggcggtatttgaagaatcgatttgccaagaaatggcaaacatt
accggagacgaactttggatagaagatagaaagaacaggaaaacactaactttagagcat
catatggctgcaaggcgaggggggttttcaagcttctttgaccctctgtatgcaattgat
aagctcaggactagtttacttgatggtacccatgcttgtatcacccttttctcaggccga
gttctaccacttatcgataacttgaagtcagggaataagtttgctgttagccgaatcgta
aacaaatactcccctcttatctctgctgaacatttacaagtcagtagtaaccctagagcg
gaactggataaggccaagcatgctgttgattcactccacggtttgtgggatggagcctca
gagcctagcctgcacagcatactcaaagaaatccatcgtagcggactatttcctttacca
gaaactttagctgttatcgcaactagagatgaggaaaaagagtatcaagagcctgagagt
gaacgtgatatcaatccaactattgatgcgtgggacaatgctcttaaagcaaagttcagc
gagtttaaagcttacgttcagtatatttcagacgattcagaattcggcacccatcaaggt
atcaaagggcttgagtttccccgagttatggtcgtactagatgatgaagaggctcgtgga
tttttattcagttatgacaaactatttggagctaagcctctctcagaaacagatcagcgt
aaccaaagagaaggcaaagagactggaattgatcgaaccaaaagactcttttatgtcact
tgcagtcgagctgaagaaagcttggctgttatcgcctatacaaacgaacccgaagaagta
gctaggacagcactccagcaaggttggtttgacgagggggagattatccaccttccaaaa
actgtgttggaatag
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