Vibrio sp. D3: ACHFJ9_01520
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Entry
ACHFJ9_01520 CDS
T11387
Name
(GenBank) PolC-type DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vii Vibrio sp. D3
Pathway
vii03030
DNA replication
vii03430
Mismatch repair
vii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACHFJ9_01520
03430 Mismatch repair
ACHFJ9_01520
03440 Homologous recombination
ACHFJ9_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vii03032
]
ACHFJ9_01520
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_01520
Enzymes [BR:
vii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACHFJ9_01520
DNA replication proteins [BR:
vii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACHFJ9_01520
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACHFJ9_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XJJ24980
LinkDB
All DBs
Position
1:348148..348762
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AA seq
204 aa
AA seq
DB search
MPQANSVVVLDFETTGLSPTLGDRAIEIGAVKLVDGEVVDSFQQLMNPGFRVSSFIENYT
GITNNMLRSAPSCEEVMASFSEFIAGENLIAHNASFDKRFLDAELERINCGYSGEFACSL
LVARRLIQDAPSHKLGELVRYKNIDNDGVFHRALADAQMTAKLWLLMVEGLENSGIVKPS
FQLMQTVSKTAKGKVDLLLAKSRA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcaaactctgtggtcgtactcgactttgaaaccacaggtctctctcctact
ttaggtgatcgcgcaatagaaattggtgcggtaaagttagtcgatggcgaggttgtcgat
agttttcagcaactcatgaatcccggtttcagagtgagttctttcattgagaactacacc
ggcattaccaacaatatgttgcgatcggcaccaagctgcgaagaggtaatggcgtcattt
agtgagttcattgctggcgagaaccttatcgctcataacgcttcattcgataaacgattt
ttagatgcagaacttgagcgaatcaactgtggttattcaggtgagtttgcttgctcctta
ctggtggcaagacggctcattcaagatgccccatcgcacaaactaggagaacttgttcgc
tataaaaatatcgacaacgacggtgtttttcaccgcgcactagccgatgcgcaaatgacg
gccaagctttggctcttaatggtcgaaggattagaaaactcaggtatcgttaagccaagt
tttcagttgatgcaaacggttagtaaaacagcaaaaggaaaggtcgacctgctactcgcc
aaaagccgtgcttaa
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