Vibrio sp. D3: ACHFJ9_05610
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Entry
ACHFJ9_05610 CDS
T11387
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vii Vibrio sp. D3
Pathway
vii00330
Arginine and proline metabolism
vii00480
Glutathione metabolism
vii01100
Metabolic pathways
vii01110
Biosynthesis of secondary metabolites
vii04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ACHFJ9_05610 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ACHFJ9_05610 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ACHFJ9_05610 (speF)
Enzymes [BR:
vii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ACHFJ9_05610 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
XJJ25465
LinkDB
All DBs
Position
1:1285499..1287646
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AA seq
715 aa
AA seq
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MPEDFSLLAESLDEQFNRHLLPLEQVELTDVGAAIITSADIKAGLHRMISETGYGIPVFL
VTDETPVSAEDYVWLTGVIDLERQSIDYYCRQINEAVTKYECRLLPPFFKQLTHYVEMGN
SAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIHEGSAHQAQAHA
AKVFNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSNHHGALIQAGGMPVYLE
TARNPWGFIGGMDEHCFDEEYIRAQIAKVSPERARDERPFRLAIIQLGTYDGTIYNARYV
MDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQSVHKQQAGFSQT
SQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFAALDVNAKIHDGEAGLRLWSD
AVKTGIEARKEILKSCELIRPFIPNEIEGQPWGSYDTDVIATNKKFFMFEPDANWHKFEG
YGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEKCDLNSILFLLT
PAEDMGKIRHLVAQINRFEKFIRDDAPLSIVLPGVYEANKERYRGYTIRQLCQEMHDMYK
ELNVKQLQKAMFRSEYFPQMVHKPDVATRKYFRGECDYLPLKEAVGRVAAEGALPYPPGI
ICVITGEIWTQQVVDYFLSLEEGINRFPGFAPEIQGVYLEDVDGRTTAHCYVLKD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagactttagcttattagctgaatctttagatgaacaatttaatcgtcactta
ctgcctttagaacaagttgaattaaccgacgttggtgcagctattattacgtcagcagac
attaaagcgggtctgcacagaatgatttcggaaacagggtacggaattcctgttttctta
gtgaccgatgaaactccagtttcggcagaagattacgtttggttaacaggggttattgat
ttagaaagacaatctatcgattactactgccgtcaaattaatgaagccgtgactaaatat
gagtgtcgtctgctccctcctttcttcaagcaattaacgcactacgttgagatgggtaac
tcggcgtttgactgtccagggcaccaaggtggtcagttcttcaaaaaacaccctgctggt
aaacaattctacgatttctttggcgaaaacctattccgtagcgacttgtgtaacgcggac
gtggacttaggtgacttactgatccacgaaggttctgcacaccaagcgcaagcacacgct
gcaaaagtatttaacgctgacaaaacttacttcgtactcaacggcacttctgcttcaaac
aaagtggtgtgtaacgcgctagtaactgaaggcgatttggtattgttcgaccgcaataac
cacaagtcaaatcaccacggcgcgttaatccaagcgggtggtatgccagtttatctagaa
acggcgcgtaacccttggggcttcattggtggtatggatgagcactgtttcgatgaagag
tacattcgtgctcaaatcgcgaaagtatctccagagcgtgcacgagatgaacgtccgttc
cgcctggccatcatccagttggggacttacgacggtacaatttataacgctcgttacgtc
atggataagatcggccacctttgtgactacatcttgtttgactcggcatgggtaggctat
gagcagttcatccctatgatgaaagattgttcgccactgctactggatctgaaaccagaa
gatgcgggtgtgatcgtgacccagtctgttcacaagcaacaagctggtttctctcaaacg
tcgcaaatccacaaaaaagaccgccatatcaaaggtcaagctcgttactgcaatcacaaa
cgctttaacaacgcgtttatgatgcacgcatcgacatctcctttctatgcgttgtttgct
gcattggatgtgaacgcgaagatccacgatggtgaagcaggcttacgtttatggagcgac
gcagttaagacaggtatcgaagcgcgtaaagaaattctcaaaagttgtgagttaattcgt
ccgttcattccaaatgaaattgaaggtcaaccttggggcagttacgacacggatgtgatc
gcgaccaacaagaagttctttatgttcgagccagatgcaaactggcacaagtttgaaggt
tatggcgaaggtcaatactttgttgacccatgtaaattgttgctaaccacggcaggcatt
gccgaagacggcagctacgcagatttcggtattccggcaacgctattggcgaacttcctt
cgagaaaacggcatcatccctgagaagtgcgacttgaactccatcttgttcctactcact
cctgccgaagatatgggtaagatccgtcaccttgtcgcgcaaatcaaccgatttgaaaaa
ttcattcgtgatgatgcacctctcagtatcgtgctaccaggcgtctacgaagcgaacaaa
gagcgctaccgtggttacaccatccgtcagctatgtcaggaaatgcatgacatgtacaaa
gagctgaacgtgaaacagctacaaaaagcgatgttccgcagtgaatacttcccacaaatg
gttcacaaaccagacgtggcaacacgtaaatacttccgcggtgaatgcgattacctacca
cttaaagaggccgtcggccgcgtagccgccgaaggtgcactgccttaccctccaggcatt
atctgtgtgatcactggtgaaatctggactcaacaggtggtggattacttcttatctcta
gaagaaggcatcaaccgattcccaggcttcgcgccagaaatccaaggtgtgtaccttgaa
gatgtcgacggtcgcactaccgcacattgctatgtcctaaaagattaa
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