KEGG   Vibrio sp. D3: ACHFJ9_05995
Entry
ACHFJ9_05995      CDS       T11387                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vii  Vibrio sp. D3
Pathway
vii02020  Two-component system
vii02040  Flagellar assembly
vii05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vii00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACHFJ9_05995
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    ACHFJ9_05995
  09142 Cell motility
   02040 Flagellar assembly
    ACHFJ9_05995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vii03021]
    ACHFJ9_05995
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vii02035]
    ACHFJ9_05995
Transcription machinery [BR:vii03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACHFJ9_05995
Bacterial motility proteins [BR:vii02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ACHFJ9_05995
SSDB
Other DBs
NCBI-ProteinID: XJJ24304
LinkDB
Position
1:complement(1371848..1372576)
AA seq 242 aa
MLDMNIQDTYTTEEEVTTPSRPIDENALLQRHQVMVKRVVNQLRVHATSHCSIEDMQQIG
LIALVEAGRRYGDVDDPHFPAFAVCRVRGAILDELRRLDWRSRKTRQQAHELNDVTRDLT
RSLGRMPTDAEIIQALGTNEQDYYNRQNAALAGEMQSLDQLMESSGDSYIGGQYDGMEHE
HIRRSLDSALGKLPKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQLNQLM
SS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttagacatgaatatacaagacacctataccacagaagaggaagtgacgacgccatca
cgcccaattgacgaaaatgcactgctgcaacgtcatcaagttatggtgaaacgcgtcgtt
aaccagctacgtgttcatgccacttctcactgtagtattgaagatatgcagcaaattggc
cttatcgctctagttgaagctggacgccgatacggcgatgttgacgatcctcatttccct
gcctttgccgtgtgtcgcgttcgaggtgcaattttagacgaattgcgccggctagattgg
cgctcacgtaaaactcgccaacaggctcacgaactcaacgacgtgactcgagatctcaca
cgctctttaggtcggatgcctacggatgcagaaatcatccaagccttggggacgaatgag
caggactattacaaccgccaaaatgccgcccttgcgggagagatgcaaagccttgaccaa
ctgatggaaagcagtggtgatagctatattggcgggcaatatgatggcatggaacatgag
catattcgtcgcagtttagatagcgctttaggcaaattgccgaagcgtgatcaattgctg
cttactctgttctatcaacatgaactcaacttacacgaaatagctctggtattggatctg
acaccacctcgtatatgtcagcttcacaaacaagcgctgaaacaactcaaccaattaatg
tcctcttag

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