Vibrio sp. D3: ACHFJ9_06560
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Entry
ACHFJ9_06560 CDS
T11387
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_06560 (phrB)
Enzymes [BR:
vii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACHFJ9_06560 (phrB)
DNA repair and recombination proteins [BR:
vii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACHFJ9_06560 (phrB)
Prokaryotic type
ACHFJ9_06560 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XJJ24409
LinkDB
All DBs
Position
1:1500828..1502243
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AA seq
471 aa
AA seq
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MILVWFRRDLRTLDHTALRAALDSGQPVVACFIATPEQWREHHMAPMQADLIARRLEYLN
DELESLNVPFLYKEVPSFSDCTEVISGWAKTLEATSVMANIHYEVNERELDAQVNEALAS
HDIDFELFHDKCVHPPTTVLNKQGEYFKVFTPFKRAWLTQFQMPAVTKPHEQAPLSSKLL
EQLEPIRFSSDFTFSYPRESSEDWFASTNDVLKQLREFARERSDAYKEDRDFPAIVGTSQ
LSPYLAIGALSPRQCIARLYAENQQNDLTEGKATWLSEIIWREFYQHLLVFEPKLVKGKG
FIDWEDKIQWSYDEQAFERWKTGATGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKDLH
IDWRWGEAYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDSDGQFVR
HWVPEIKSVPNKYIHKPWTWEGFSLLEYHKPMVDHKTEREITLRLFKSAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagtatggtttcgacgtgatttacgaacgttagaccacactgcacttagggcg
gcgttagattcaggtcagcctgttgtcgcttgttttatcgcgacgccagagcagtggcga
gaacaccacatggcgccgatgcaggcggatctcattgctcgtcgtttagagtatctcaac
gacgagttggaaagcctgaatgttccttttttatataaagaggtgccgtcgttttctgat
tgtaccgaagtgattagtggatgggcgaaaacacttgaagcaacgtctgttatggcgaat
attcactatgaagtgaatgaacgagagctcgatgcacaagtgaatgaggcgctagcttcc
catgatatcgattttgaactgtttcacgacaaatgtgtgcacccaccaacgacggttctc
aataagcaaggtgagtattttaaggtatttacaccattcaaacgtgcttggttgacgcag
tttcaaatgccagcggtaacaaagcctcacgaacaagcgccgctaagcagtaaactattg
gaacaattagagccgattcgatttagttcagacttcacgtttagctatcctcgagagtcc
agcgaggattggtttgcttcgaccaatgatgttttaaagcagcttagggaatttgctcgt
gagcgcagtgatgcttacaaggaagatcgagattttccggctattgttggcaccagtcaa
ctgtctccctatcttgcgattggtgcattgtcaccaaggcaatgtattgctcgcttgtat
gctgaaaaccaacaaaatgacctaacagaagggaaagcaacttggttgagtgagatcatt
tggcgtgagttttatcagcatctgttggttttcgaaccaaagctcgttaaaggcaaaggc
tttatcgactgggaagataaaattcaatggtcttatgatgagcaggcttttgagcgatgg
aagacaggagcgacagggtacccgatcgtcgatgcagcaatgcgtcagctcaaccaaaca
ggctggatgcataacaggcttcgcatggttgtcgcgagctttctcaccaaggacttacac
attgactggcgttggggcgaagcgtacttcatgagtaagttggtggacggcgatttcgca
gcaaacaatggtggttggcagtggtctgcatcgacggggtgtgatgggcagccgtacttc
cgtattttcaacccgataagccaaggtgagaagtttgactctgatggtcaattcgtgcgc
cactgggtgcctgaaatcaaaagtgtgccaaacaaatacatccataaaccttggacttgg
gagggattttctttactggaatatcacaagccgatggttgatcacaagacagaaagagag
ataaccttacggctctttaaaagtgccaaggaataa
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