Vibrio sp. D3: ACHFJ9_06675
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Entry
ACHFJ9_06675 CDS
T11387
Name
(GenBank) LuxR C-terminal-related transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vii Vibrio sp. D3
Pathway
vii05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ACHFJ9_06675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vii03000
]
ACHFJ9_06675
Transcription factors [BR:
vii03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ACHFJ9_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_30
HTH_23
HTH_40
HTH_11
HTH_24
HTH_10
DUF7342
HTH_7
Motif
Other DBs
NCBI-ProteinID:
XJJ24432
LinkDB
All DBs
Position
1:1531916..1532584
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AA seq
222 aa
AA seq
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MEQQKTRNVILITEGSLQSSLLKDVLETKLGISVALITPNSLIQGALDSPLASAIIVDCS
VITDEIFRRYSEFKESQQKDTLEILINCDQSISTEDLFAWRTLAGIFYTSDDIKTLQVGI
GKVLQGDMWFSRKFSQQYITHLRRHCKPINKNVPAILTKREQQIITFLSMGASNQQIAEQ
LFVSENTVKTHLHNIFKKIEVKNRVQALIWAKENISDNSLTV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaaaaaacaagaaatgtcattttaatcacggagggcagtctgcagtcatct
ctgctgaaagatgtattggagaccaaactcggtattagtgttgctctaatcacaccaaac
tctcttattcaaggagcgttagattcgcctttagcgtcagccattattgttgattgcagc
gtgatcactgatgaaatatttcggcgttattcggagtttaaagagtcgcaacagaaagat
acgctcgaaatcttaattaattgtgatcaatccatttcgactgaagatctttttgcttgg
cgtactctagcaggtattttctatacctctgatgatataaaaacgctgcaagttgggatt
ggtaaggtacttcagggggatatgtggttcagccgtaagttttctcagcaatacattact
caccttcgtcgccactgcaaaccgataaataagaatgttcccgctattttgaccaaacga
gaacaacaaataattacctttctctctatgggggcttccaatcaacaaattgccgaacaa
ctatttgtgagcgagaatacggtaaagactcatttacacaatattttcaagaagattgaa
gtaaaaaatagagtccaagcacttatttgggcgaaagaaaatatttcggataactcgtta
acagtgtaa
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