Vibrio sp. D3: ACHFJ9_07980
Help
Entry
ACHFJ9_07980 CDS
T11387
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
vii Vibrio sp. D3
Pathway
vii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHFJ9_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vii03019
]
ACHFJ9_07980
03009 Ribosome biogenesis [BR:
vii03009
]
ACHFJ9_07980
Enzymes [BR:
vii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACHFJ9_07980
Messenger RNA biogenesis [BR:
vii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACHFJ9_07980
Ribosome biogenesis [BR:
vii03009
]
Prokaryotic type
rRNA helicases
ACHFJ9_07980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XJJ24682
LinkDB
All DBs
Position
1:1831599..1833545
Genome browser
AA seq
648 aa
AA seq
DB search
MQDSVIQFSDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAF
SLPLLNKIDLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMR
ALKSGAQVIVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPES
AQRVLFSATMPPMLKKIVERFLREPVMVDVAGKNHTVDKVQQQFWVVKGVEKDEAMSRLL
ETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV
ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI
ERVTKSSMEEIQLPLRDQVAEARLAKLGAELEAEKEHKALDKFAELVEKLQTSLDIDPAT
LAAMLLKRQQGKRPLFYIGEDPMVEAIERDKQRRKERREGGREGGRDGGRNFNNQDWDTY
QLQVGREQGVQVKDIVGALANELGLGKGSIGAIKLAQGHTFVQLPKAMTSEAAGKLSKLR
IRQQDVGAVVCDFDDFRESRGGRRDGGRRDGGRRDGGGYRGNREGGNRGGDRREGGRREG
GFRGNRDGNRDGNREGGERRFDRNRGGDHRGNHRGERGHGRGRRTQEA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattctgttattcaattcagcgatttatctctgaatgattctatcctttctgct
ctagacggaatgggtttcgtgtcaccaactccaattcaggctgcggcaatcccacacctg
ttggaaggtgctgacgcgctgggtaaagctcaaacaggtacaggtaaaacggcagcgttc
tctctgcctcttctaaataagatcgatctcaaccaacgtaaaccacaagctatcgttctt
gcgccaacgcgtgagttagcgatccaggttgcggctgaaatgaaaaaccttggtaagaac
atcaagggtcttaaagttttagagatttacggtggtgcttctatcgtagatcagatgcgt
gctcttaagagcggtgcacaagttatcgttggtactccaggtcgtgttcaagaccttatc
aaccgtgaacgtctacacctagatgaagtaaacacgtttgtactagacgaagctgacgaa
atgctaaacatgggtttcgttgatgacgttactgcgatcatggaacacgcaccagagtct
gctcaacgcgttctattctctgcaacaatgcctccgatgcttaagaaaatcgttgagcgt
ttcctacgtgagcctgtaatggttgacgttgctggtaagaaccacactgtagacaaagtt
caacaacagttctgggtagtgaagggtgtagagaaagatgaagcgatgtctcgtcttctt
gaaacggaagaaactgatgcgtcaatcgtcttcgtacgtactcgtcaagacactgagcgt
ctagctgattggctatctgcacgtggctttaaagcggcagctctgcacggtgacattcct
cagtctctacgtgagcgtactgttgatcacatcaaacaaggtgttatcgacatcctagtt
gcaactgacgttgttgcacgtggtcttgatgttccacgtattacgcacgtattcaactac
gacatcccattcgatgttgagtcttacatccaccgtatcggtcgtactggccgtgctgga
cgtaaaggtaaagcgatccttcttgttcgcactaaccaaatccgtatgcttcgcactatc
gagcgcgtaactaagtcatctatggaagagattcaacttcctctacgtgaccaagttgct
gaagctcgtctagctaagctaggcgctgagcttgaagcagagaaagagcacaaagctcta
gacaaatttgctgagctagtagagaaactacaaacttctctagacatcgacccagcaacg
cttgctgctatgcttcttaagcgtcagcaaggtaaacgtcctctgttctacattggcgaa
gacccaatggttgaagcgattgagcgtgataagcaacgccgtaaagagcgccgtgaaggt
ggtcgtgaaggtggtcgtgacggcggtcgtaacttcaacaaccaagattgggatacttac
cagcttcaagttggtcgcgagcaaggtgttcaagttaaagacatcgttggtgctctagcg
aacgaactaggtctaggtaaaggctctatcggtgcgatcaagctagcacaaggccacaca
ttcgttcagctaccaaaagcaatgacttctgaagctgcgggcaagctaagcaaactacgc
atccgtcaacaagatgttggtgctgtagtatgtgacttcgatgacttccgagagtctcgt
ggtggtcgccgtgacggtggtcgtcgtgatggcggtcgtcgtgatggcggcggttaccgt
ggcaaccgcgaaggcggcaaccgtggtggtgatcgtcgtgaaggcggtcgtcgcgaaggt
ggcttccgtggtaaccgtgacggcaaccgcgatggtaaccgtgagggtggcgaacgtcgc
ttcgatcgtaaccgtggtggtgatcaccgtggtaaccaccgtggtgagcgtggtcacggc
cgtggtcgtcgcactcaagaagcataa
DBGET
integrated database retrieval system
