Vibrio sp. D3: ACHFJ9_08055
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Entry
ACHFJ9_08055 CDS
T11387
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vii Vibrio sp. D3
Pathway
vii03030
DNA replication
vii03430
Mismatch repair
vii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACHFJ9_08055 (dnaN)
03430 Mismatch repair
ACHFJ9_08055 (dnaN)
03440 Homologous recombination
ACHFJ9_08055 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vii03032
]
ACHFJ9_08055 (dnaN)
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_08055 (dnaN)
Enzymes [BR:
vii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACHFJ9_08055 (dnaN)
DNA replication proteins [BR:
vii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACHFJ9_08055 (dnaN)
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACHFJ9_08055 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
XJJ26882
LinkDB
All DBs
Position
2:1471..2571
Genome browser
AA seq
366 aa
AA seq
DB search
MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVTLE
GDFEAGSITVPSRKFLDICRGLPDDAIITFVLEGDRVQVRSGRSRFSLATLPANDFPNIE
DWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVS
QTQLGADFAQKQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFTFTSKLVDGR
FPDYRRVLPQSTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITANNPEQE
EAEEMLDVTFEGDAIEIGFNVSYVLDVLNTLRCENVRVSMSDANASALIENADDDSAMYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccattgaacgtagtcatttaatcaaaccgctacagcaggtttcgggcgct
ttaggtggccgaccaactctgccaatcctaggtaacctacttcttaaagtagaagagaac
gtattgtcgatgacggcaaccgatcttgaagtagagttagtaagcaaagtgacgctagaa
ggtgattttgaagcgggcagcattaccgttccttcgcgtaagtttctcgatatctgccgt
ggtttaccggacgatgcgatcatcacatttgttttagaaggtgatcgcgtacaagttcgc
tctggtcgcagccgtttctcattggcaacgcttcctgcgaacgatttccctaatattgaa
gactggcaaagtgaagtggaagtatcactgagccaagctgatttacgtacgctgatcgac
aaaactcagttctcgatggcgaatcaagacgttcgttactacctcaacggcatgttgttt
gaaattgacggcaccacgctacgcagcgtggcgacggacggccaccgtatggcggtatcg
caaactcagctaggtgcagactttgcgcagaagcaaatcatcgtgccacgcaaaggtgtg
caagaattagtaaagttgatggatgcgccagagcagcccgtagttcttcagatcggtagc
tccaatgttcgtgctgaggtgaataactttacttttacctctaagttggttgatggtcgt
ttccctgactaccgccgcgtattgcctcagagcaccaataagaccctaatagcaagttgt
gacgagttgcgccaagccttctctcgtgctgcgattctttccaacgaaaaattccgtggc
gtgcgtgtgaatctggctgatactgaaatgcgcataaccgcgaataacccagaacaagaa
gaagcggaagagatgcttgatgtgacctttgaaggtgacgccatcgaaatcggctttaac
gtaagctatgtgcttgatgttctgaacacgttgcgttgtgaaaatgtacgtgtgtcgatg
tcggatgctaacgctagcgcattgattgaaaatgccgacgatgacagtgccatgtacgtg
gtgatgccaattcgtctataa
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