KEGG   Vibrio sp. D3: ACHFJ9_08715
Entry
ACHFJ9_08715      CDS       T11387                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vii  Vibrio sp. D3
Pathway
vii03070  Bacterial secretion system
vii05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vii00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ACHFJ9_08715 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    ACHFJ9_08715 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vii02044]
    ACHFJ9_08715 (gspD)
Secretion system [BR:vii02044]
 Type II secretion system
  General secretion pathway protein
   ACHFJ9_08715 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom
Other DBs
NCBI-ProteinID: XJJ26994
LinkDB
Position
2:150146..152164
AA seq 672 aa
MKHWFSKSAWLLAGSLLCVPGAIANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDGSAQG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIELVELRNASAAEMVRIVEALNKSTNQKSTPEFLEPKIVADERTNAILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKNAKAEDLVDVLKGVSDNLQAEKQVGQKAS
GAQRGEVVIAAHAATNALVLTAPPDIMNALQDVIAQLDIRRAQVLIEALIVEMSEGDGIN
LGVQWGSLETGAVIQYGNSGAPIGQVMVGLEEAKDQTRTEYYTNANGERTPYDVTESGDY
STLASALSGVNGAAMSIVMGDWTALVSAVATDSNSNILSSPSITVMDNGEASFIVGEEVP
VITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVR
FAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTEKRNL
MVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKADQGLKLMADEKIPVMPAFGQERQHPT
EIQAFIDQMENN
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtgaaacattggttcagcaaaagtgcctggctactagcaggaagtttactctgcgtccca
ggtgcaatagcaaacgaatttagtgccagctttaaaggcactgacattcaagaattcatc
aacatagtgggtcgtaatctcgaaaagaccatcattgttgacccttcagtgcgcggtaaa
atcgatgtccgcagctatgacgtgcttaacgaagagcaatactacagctttttccttaac
gtactcgaagtatacggctacgccgtcgtagaaatggacaacggtgtacttaaggttatc
aaagcgaaagactcaaaaacgtcagcaatccctgtattaggtgatggcagcgcgcaaggc
gacagcgttatcactcgagttgttgcggtacgtaatgtgtcggttcgtgagttgtctcct
ctacttcgtcaactgattgataatgctggtgctggtaacgtagttcactacgatcctgcg
aacatcatcttaatcacaggtcgtgcggcggtcgtgaatcgcttagcggaaatcattaag
cgtgttgaccaagcgggtgataaagaaattgagctggtggaactgcgcaatgcttctgct
gccgaaatggtgcgtattgttgaagcactgaataaaagcaccaatcagaagagcacgcct
gagttccttgagcctaaaattgttgccgatgaacgcaccaacgcgattttgatttctggc
gatcctaaagtacgtgcgcgtctgaagcgattgattcgtcaacttgacgttgaaatggcg
accaaaggtaacaaccgcgtggtttacctgaagaacgcgaaagctgaagatttggtggat
gtactaaaaggtgtctccgataacctacaagctgaaaagcaagtcggccagaaagcgtca
ggtgcccagcgtggtgaagtggtgattgctgcgcacgcagcgaccaacgccttagtatta
acggctccaccagatatcatgaatgcgctacaagatgttattgctcagcttgatattcgt
cgtgctcaagtcttgattgaggcgctgatcgttgaaatgtcagaaggtgacggcattaac
ttaggtgttcagtggggctcactggaaaccggtgcggtgattcagtacggtaactctggt
gcaccgattggtcaggtgatggttggtctagaagaagcaaaagatcaaactcgaactgaa
tactacacaaatgcgaatggcgaacgaacgccatatgatgttactgaatctggtgactat
tctactcttgcatcggcactgagcggtgttaacggtgctgcgatgagcatcgtgatgggg
gactggactgccttagtcagtgccgtagcgactgactccaactcaaacattctatcttct
ccaagtatcaccgtaatggataatggtgaagcatcatttattgttggtgaagaagtgcct
gttatcacaggctctacggctggctcaaacaacgacaatccattccaaacggttgatcgt
aaagaagtgggcatcaagcttaaggttgtgccacaaattaacgaaggtgactctgttcag
ttaaatatcgagcaagaagtgtccaatgtattaggtgcaaacggtgcggttgacgttcgc
tttgctaagcgtcagttaaatacctcagtcatgatccaagatggtcagatgctggttctt
ggtggcttggttgatgaacgtgcactcgaaagtgagtcaaaagtaccgctactgggtgac
atcccagtgcttggtcatttgttcaaatcaaccagcacgcaaacagaaaagcgtaacttg
atggtgttcatcaagccgacgattattcgtgatggtatgaccgcagacggcattacacag
cgcaaatacaactttattcgcgcagagcaactctacaaagcggatcaaggattgaagttg
atggctgacgagaagatcccagtcatgccggcctttggtcaggagcgtcagcacccaacc
gagatccaagcgtttattgatcagatggaaaataactaa

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