Vibrio sp. D3: ACHFJ9_10980
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Entry
ACHFJ9_10980 CDS
T11387
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vii02000
]
ACHFJ9_10980 (bamB)
Transporters [BR:
vii02000
]
Other transporters
Pores ion channels [TC:
1
]
ACHFJ9_10980 (bamB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_EML_2
DUF7957
WD40_like
Motif
Other DBs
NCBI-ProteinID:
XJJ27421
LinkDB
All DBs
Position
2:636636..637796
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AA seq
386 aa
AA seq
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MKRVFNKALLGALTMGILAGCAGEKDTIVMAPLPQVDSEFTTSSEWSTSVGDGVGHYFSK
LSPVFANDTLFVASRDGLVKALDPENGKQRWQTDLEEDVIARLSGGITAAYGNLYIGSEN
GEVISLDQETGEIVWRVKVGGEVLAKPVADSGLIIINTSRGMLIALNESTGEQRWALSTE
VPNLTLRGDSTPTAIGGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
SSPIVLGGTLFTIGYNGQLIAIDLRSANPIWKRNYSSATDISTDGSRIFVITEKDHVVAV
DSRSGTELWENSLLEHRQLTAPVIIGNYLVVGDTLGYLHWMDRSTGEFVAQQFIDDSGLA
VGPTLLSDGYVITTRNGDVKKLTINE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtctttaacaaagccttgttaggggcgctaacaatgggaattcttgccggt
tgtgctggtgagaaagataccattgtaatggcgccactacctcaggtagacagtgagttt
acaaccagtagtgagtggagcacatcggttggcgatggtgttggtcattacttttcaaag
ctatcccctgtatttgcgaatgatacattgttcgtggcaagtcgcgatggcttagtaaaa
gcgctggatcctgaaaacggtaaacaacgttggcaaacggacctagaagaagatgtcatt
gctcgtctctctggtggtatcacagccgcatacggaaacctttacattggctctgagaat
ggtgaagtcatctctcttgaccaagaaacaggtgagattgtttggcgtgtaaaagttggt
ggtgaggtactggcgaagccagttgcagattcaggccttattatcatcaatactagccga
ggcatgttgattgcccttaatgagagtacaggtgagcaacgctgggcattgagtacagaa
gtgccgaacctaactttacgtggcgacagtactccgactgcaattggcggcggtgtattt
tggggaacggcaaatggccgactcgcagctgctatcgttgagcgtggtcagttgatttgg
caacagcctgttggtacgccaaaaggcgcgacagaaattgatcgtttggttgatgttgat
tcatcgccaattgtgctaggcggtactcttttcaccattggatacaatggtcaacttatc
gccattgatttgcgttcagcgaacccgatttggaagcgtaattactcatctgcaacagac
atttctacagatggtagccgcatctttgtgataacggaaaaagatcatgttgttgccgtt
gattcacgaagtgggactgagttgtgggaaaacagcttgcttgagcaccgacaacttaca
gcgccagttattatcggcaattatctcgttgtcggtgacacgcttggttaccttcactgg
atggatcgttcaacgggcgaatttgttgcgcagcagtttatcgatgatagcggcttggcc
gttggcccgacgttattgtcggatggttatgtgattacaactcgcaacggcgatgtaaag
aaactaaccattaacgaataa
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