KEGG   Vibrio sp. D3: ACHFJ9_11415
Entry
ACHFJ9_11415      CDS       T11387                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vii  Vibrio sp. D3
Pathway
vii00740  Riboflavin metabolism
vii01100  Metabolic pathways
vii01110  Biosynthesis of secondary metabolites
vii01240  Biosynthesis of cofactors
vii02024  Quorum sensing
Module
vii_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vii00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    ACHFJ9_11415 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACHFJ9_11415 (ribD)
Enzymes [BR:vii01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     ACHFJ9_11415 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     ACHFJ9_11415 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD HPS6
Other DBs
NCBI-ProteinID: XJJ27502
LinkDB
Position
2:740024..741151
AA seq 375 aa
MTQHTPERAFSDLDFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEP
HAEVHAMRMAGEKAVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAG
RGIQMLRDAGIEVQIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQ
WITSPAARQDVQRYRAMSGGILSTSKTVIDDNASLNVRWDDLPTSVQAQYLREELRQPVR
VILDRQNHLTDALKLFHTDGERVIVSPDGDSIPLLDSADQIDLSTTLKRISDEHHINHLW
VEAGATLASAMIKANLVDELIVYLAPKLMGSDGRGLIGALGLSAMADVTDLNITDVRMVG
VDIRITATIKRKELR
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgactcaacacactcctgaaagagcgttttctgatttagatttcgccatgatgtcacga
gctattaagttagcgagacgtggcatttataccaccgccccaaatccaaatgtggggtgc
gtcatcgttcgtgatgaagaaattgttggtgagggctatcaccaccgcgctggtgagccg
catgccgaagtgcacgcgatgcgcatggcgggtgaaaaagcagttggtgcaaccgcttat
gtgacgctcgaaccttgctctcattacggccgtacaccgccatgtgctgaagggctaatc
aaagccaaagtggctcgtgtggtttgcgcaatggtagacccaaaccctaaagttgcgggg
cggggcatccagatgttgcgtgatgccggaattgaagtacaaatcggcttgttagagcaa
gatgcccttgcccttaaccctggttttataaagtacatgcgtacaggcatgccgtttgtt
caattaaaaatggcagccagtttggatgggcaaagcgcactcagcaatgggcagagccaa
tggatcacctccccagcggcccgccaagatgtgcagcgttatcgagcgatgagtggtggc
attctctctaccagcaaaacggtgattgatgataatgcgtcactcaatgtgcgttgggat
gacttacctaccagtgttcaagcgcagtatttacgagaagaacttcgtcaaccagtacgt
gtaatcttagaccgtcagaaccatttaacggatgcgctcaagctgttccacaccgatgga
gagcgagttattgttagcccagatggagacagtatccctctattggacagcgctgaccaa
attgacttatcaacaacattaaaacgtatctcggatgagcaccacatcaatcacttatgg
gttgaagctggagcaacgctagccagcgcgatgataaaggctaatcttgtagatgagctc
attgtttaccttgcgccaaaactcatgggcagcgatggtcgggggctgattggtgcttta
gggttaagcgctatggctgacgtcactgatttaaacattacagacgttcgtatggttggg
gtagacattcgcatcactgccaccatcaaacgtaaagaacttagataa

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