Vibrio sp. D3: ACHFJ9_11460
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Entry
ACHFJ9_11460 CDS
T11387
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vii Vibrio sp. D3
Pathway
vii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACHFJ9_11460 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_11460 (xseB)
Enzymes [BR:
vii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACHFJ9_11460 (xseB)
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACHFJ9_11460 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
YgzA
COMM_domain
Vps53_N
LRIM1_dimer
Motif
Other DBs
NCBI-ProteinID:
XJJ27511
LinkDB
All DBs
Position
2:complement(748684..748926)
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AA seq
80 aa
AA seq
DB search
MAVKKPENMTFEATIEELDSLVDQLENGDLALDDALRKFERGIALARAGQTKLSDAEQRV
SILLSEDDEAPLSDFKPDSE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaagaaaccagaaaacatgaccttcgaagcaaccattgaagagcttgatagc
ttggttgatcaattagaaaatggcgatcttgccctagatgatgctctacgtaagtttgaa
cgaggcattgccttagctcgtgctggccaaactaaacttagcgacgccgaacagcgcgta
agtattcttcttagcgaagatgatgaagcaccactgagtgacttcaaaccagattcagaa
taa
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