Vibrio sp. D3: ACHFJ9_11620
Help
Entry
ACHFJ9_11620 CDS
T11387
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vii Vibrio sp. D3
Pathway
vii00550
Peptidoglycan biosynthesis
vii01100
Metabolic pathways
vii01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACHFJ9_11620 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACHFJ9_11620 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vii01011
]
ACHFJ9_11620 (mrdA)
Enzymes [BR:
vii01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACHFJ9_11620 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vii01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACHFJ9_11620 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XJJ27542
LinkDB
All DBs
Position
2:complement(783875..785791)
Genome browser
AA seq
638 aa
AA seq
DB search
MIRKRRSQIRDYQAEARLFASRAIVAFIGIVLLMGALVANMYNIQVNQFQDYQTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDATIQELQTILEITPDQIER
FHQERKRTRRFKSVPLLTQLNEKQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDMQRLIREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAVVIDPRDNGVLAMVSSPSYDPNSFV
HGISGKDYRALLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVVTPNTTRNDPGYW
RIPNSNTRPFRDWLRWGHGRVDIIKSIEESVDTFYYQIAYDMGIDRISNWMMMFGFGDYT
GIDIYEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGE
VIAPHLLKATIENGNDFEEQQTTEYVTYPPIKNVPKKYWDMAKEGMRRVNHGTRGTARRS
FYKMSYQTAGKSGTAQVFGLGENEEYNADEIAEHLRDHALFTGFAPFDDPKVVVTVVLEN
AGGGSSNGAPVVRKIFDRVVLGPEEIEPDNNAKKEVKQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaagcgccgcagtcaaatccgagattatcaagccgaagcgcgtctgtttgcc
agccgcgctattgtcgcttttatcggcattgttctcttgatgggagctctggtcgccaat
atgtacaacattcaggtgaaccagtttcaagattatcaaacccgctcgaacgataaccgt
atcaaagtggttcctatcgcgcctaaccgaggtctgatttatgatcgaaatggtgtttta
ctggcagagaaccgtcccgtctttaacttagaactgactccagaaaaaattaaagacatt
gatgcaaccatccaagaactacaaaccattctggaaattaccccagatcagattgaacgt
ttccaccaagagcgtaaacggactcgtcgatttaagtcggtcccactgcttacccaactg
aacgaaaaacaagtagcggtattctccgtcaatcagtaccgctttcctggtgtagaaata
agtgcgaccttaaagcgctactaccctttcagcgaagtcttaacccacgtgattggttac
gtttctcgaatcaatgatcgcgacatgcagcgcctgatccgagaagaaaaagacgcaaac
tatcaagccactcgcgacattggtaagctgggtatcgaaaaatactacgaagacctctta
cacggtacggccggatatcaagaagtcgaagtaaacagccgcggccgagtaattcgtacg
ttaaagtacgttccacctgtacccggaaaagacatcgttttaaaccttgatatcaacttg
cagctgtacgtacaccaattattggatggccgcagaggcagtgctgtagtgatcgatcct
agagacaacggcgtactggctatggtttcaagtcctagctacgatcctaactcgttcgtg
cacggaatctcaggtaaagactatcgcgcccttttgaacgataaaaaccgtcccttggtc
aaccgaaccacacttggcatttatccacccgcgtctaccatcaaaccatttatggcggta
gccgcgctacaagaaggtgtcgtcacaccgaacactacgcgaaatgatcctggttattgg
cgcataccaaactccaacactcgcccattccgtgactggttgcgttgggggcacggacgc
gtcgatatcattaagtcgatcgaagagtctgttgataccttctactatcaaatcgcttat
gacatgggtattgaccgtatttcgaattggatgatgatgttcggttttggtgattacact
ggcatcgatatctacgaagaaagtaaggcgaatatgccgactcgtgactggaaaatgtct
cgccataaaaccccgtggtacaaaggcgatacgatccctgtgggtatcggtcaaggttat
tggacagcaacaccaatgcaaatcgccaaagcgacctccgtattagtaaatgagggagaa
gtgatcgcacctcacttactaaaagcgacgatagagaacggcaacgacttcgaagaacaa
caaacaacagaatacgtgacttacccgccaatcaagaatgtaccgaaaaagtactgggat
atggcgaaagaaggcatgcgtcgtgtaaaccatggcacgcgcggaacagctcgccgctca
ttctacaaaatgagttatcaaacagcgggtaaatcaggtactgcgcaagtcttcggtctg
ggtgaaaacgaagagtacaacgcagatgagatcgccgaacacttacgtgaccatgcgtta
tttactggctttgcaccatttgatgatcctaaagtggtcgtcactgtagtgctagaaaac
gccggcggtggttctagcaacggagccccagtagtgagaaagatctttgatcgagtcgta
cttggcccagaagaaattgagcctgataacaatgcgaagaaagaggtaaaacagtaa
DBGET
integrated database retrieval system
